| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584903
Identifier: 188584903
GI number: 188584903
Start: 276274
End: 277110
Strand: Direct
Name: 188584903
Synonym: Nther_0262
Alternate gene names: NA
Gene position: 276274-277110 (Clockwise)
Preceding gene: 188584902
Following gene: 188584904
Centisome position: 8.73
GC content: 34.05
Gene sequence:
>837_bases TTGTCTAACACAAAGCGTCTTTTAACAATTTTTGTTATATTGGCAATTACAATTGTTATATCTAGTTGTAACGAACAAGA AGAATTGGAAATCGAGGATGATTTGTTGACAAAATCAAAAATATTAGAGGTGCTAGAAGAAGAATACGAACTTGAGGAAA TAGAAGCAAAATCTCCTGTAGATGAGTTAAAAGAGGAAAGCAATATGATTGATGCATCATATCAATTTGATGACTTACCA GGAGAGCTATTCATTTATATTTTTGAGTCTATTGAAGAGAGAAATGAGCATTTTTCACATGAATTTTCTTATACTAGACC TCTAGAGGAGGAGCAGGGAGTAGATTATTCCGCCTATAATGCTCAAAATGCTGCTATTGTTTATAGGCCACTAGATCAAG AAAATGTATTAGGACAAACTGCCCAATTAAGCGAAATTATTTTATATCAATTGAATGATATAAACGAAACAAGCTATAAA GGAGAAGGCGAAAACTGGCAGGTAGAATTAAATGCTTCTTATTATGATTATGAATTAGAGACTGAAGATGAAAATGACAT TTTTGGGTTGTTGACATATGAAATATATTATAAAGGTGATAATCACGATGAAGTTATCGATATGATGTTATATTTTCCTC ATAGTGATGGCCAAGGTAAAGCAGGAGGCGGTAGAGGTGCGGGAGAACCTTTCTTAGAGAAAGGAGAACCTGTAAAATTA GACTTTTCAGGTAAAACCCTACCCGATGGCTTAGGCAATGACCAAACGGAAGTAATCATTGAATGGGAAGAAGACAGTGA ACAACTAGAAGAAGTTATTACATTGGGGAAAGAATGA
Upstream 100 bases:
>100_bases AAGATATTTACTGTGAAACAGTTGATAATAAATGAATAAAATTTATTTTTCTATACTTGTTATTTTTTGAATTAAATCTA TAGATCGGAGGTGGTTATTT
Downstream 100 bases:
>100_bases TTAAATAAAAAATATTTTAAGTTCTTTACACTAAAATGTTAAATAATACGTATCATCTGACTACTGCGGCACATTTGATA TTTTATCTTAATTAATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSNTKRLLTIFVILAITIVISSCNEQEELEIEDDLLTKSKILEVLEEEYELEEIEAKSPVDELKEESNMIDASYQFDDLP GELFIYIFESIEERNEHFSHEFSYTRPLEEEQGVDYSAYNAQNAAIVYRPLDQENVLGQTAQLSEIILYQLNDINETSYK GEGENWQVELNASYYDYELETEDENDIFGLLTYEIYYKGDNHDEVIDMMLYFPHSDGQGKAGGGRGAGEPFLEKGEPVKL DFSGKTLPDGLGNDQTEVIIEWEEDSEQLEEVITLGKE
Sequences:
>Translated_278_residues MSNTKRLLTIFVILAITIVISSCNEQEELEIEDDLLTKSKILEVLEEEYELEEIEAKSPVDELKEESNMIDASYQFDDLP GELFIYIFESIEERNEHFSHEFSYTRPLEEEQGVDYSAYNAQNAAIVYRPLDQENVLGQTAQLSEIILYQLNDINETSYK GEGENWQVELNASYYDYELETEDENDIFGLLTYEIYYKGDNHDEVIDMMLYFPHSDGQGKAGGGRGAGEPFLEKGEPVKL DFSGKTLPDGLGNDQTEVIIEWEEDSEQLEEVITLGKE >Mature_277_residues SNTKRLLTIFVILAITIVISSCNEQEELEIEDDLLTKSKILEVLEEEYELEEIEAKSPVDELKEESNMIDASYQFDDLPG ELFIYIFESIEERNEHFSHEFSYTRPLEEEQGVDYSAYNAQNAAIVYRPLDQENVLGQTAQLSEIILYQLNDINETSYKG EGENWQVELNASYYDYELETEDENDIFGLLTYEIYYKGDNHDEVIDMMLYFPHSDGQGKAGGGRGAGEPFLEKGEPVKLD FSGKTLPDGLGNDQTEVIIEWEEDSEQLEEVITLGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31900; Mature: 31769
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTKRLLTIFVILAITIVISSCNEQEELEIEDDLLTKSKILEVLEEEYELEEIEAKSPV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DELKEESNMIDASYQFDDLPGELFIYIFESIEERNEHFSHEFSYTRPLEEEQGVDYSAYN HHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEC AQNAAIVYRPLDQENVLGQTAQLSEIILYQLNDINETSYKGEGENWQVELNASYYDYELE CCCCEEEEECCCCHHHCCCHHHHHHHHEEHCCCCCCCCCCCCCCCEEEEEECEEEEEEEC TEDENDIFGLLTYEIYYKGDNHDEVIDMMLYFPHSDGQGKAGGGRGAGEPFLEKGEPVKL CCCCCCEEEEEEEEEEEECCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEE DFSGKTLPDGLGNDQTEVIIEWEEDSEQLEEVITLGKE EECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCC >Mature Secondary Structure SNTKRLLTIFVILAITIVISSCNEQEELEIEDDLLTKSKILEVLEEEYELEEIEAKSPV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DELKEESNMIDASYQFDDLPGELFIYIFESIEERNEHFSHEFSYTRPLEEEQGVDYSAYN HHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEC AQNAAIVYRPLDQENVLGQTAQLSEIILYQLNDINETSYKGEGENWQVELNASYYDYELE CCCCEEEEECCCCHHHCCCHHHHHHHHEEHCCCCCCCCCCCCCCCEEEEEECEEEEEEEC TEDENDIFGLLTYEIYYKGDNHDEVIDMMLYFPHSDGQGKAGGGRGAGEPFLEKGEPVKL CCCCCCEEEEEEEEEEEECCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEE DFSGKTLPDGLGNDQTEVIIEWEEDSEQLEEVITLGKE EECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA