The gene/protein map for NC_010698 is currently unavailable.
Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is mod [H]

Identifier: 188528291

GI number: 188528291

Start: 1519775

End: 1521676

Strand: Reverse

Name: mod [H]

Synonym: HPSH_07815

Alternate gene names: 188528291

Gene position: 1521676-1519775 (Counterclockwise)

Preceding gene: 188528292

Following gene: 188528290

Centisome position: 94.6

GC content: 36.33

Gene sequence:

>1902_bases
ATGCAAAATAAAGAAATTTATGGAGAAAAAAGCGTTAAGGAAAAAAATTTAGAGGTATTTAATCGTTATTTTCCCGGTTG
TTTGAGTGTGGAAAATGATAACAAGCTCACGCTAGATGTGAAAAGATTAAAAGCGTTATTAGGGGATTTTAGCGAGATAA
AAGAAGAGGGCTATGGGTTGGATTTTGTGGGTAAGAAAATCGCCTTAAATCAAGCTTTTAAGAAAAATAATAAGATTTTA
AAGCCCTTAAACGAATCCACTAGCAAGCACATTCTCATCAAGGGCGATAATTTAGACGCTCTCAAAATCTTAAAACAAAG
TTATAGCGAAAAAATCAAAATGATTTACATTGATCCGCCTTACAACACGAAAAACGATAACTTTATTTACAGCGATGATT
TCTCGCAATCCAATGAAGAGATTTTAAAAACATTGGATTATTCTAAAGAAAAGCTGGATTATATCAAGAATCTTTTTGGG
TCAAAATGCCATAGCGGGTGGCTTAGTTTCATGTATCCTAGATTGTTGCTCGCTAAAGATTTGCTCAAACAAGACGGCGT
GATTTTCATTTCTATTGACGATAACCAAGCCGCCCAACTCAAACTTTTATGCGATGAAATTTTTGGGGAGAGGAATTTTG
TGGCTGATTTCATTAGAAAAACTAAAAGCACGACTAATGACGCTAAAACGGGTGTCAATTACCAGCATGAGTTTTTGTTT
TGTTATGCGAAAAATAAAGAATTTGTCAATCTCTTGGGGGGAGAAAAGAATTTAGAAAATTACAAAAACCCCGATAACGA
CCCTAATGGTGCGTGGGTTTCTAGCGATCCTACTGCAAAAAGTGGCGATATAAAAACGGGCTATTTTGTCGTGAAAAATC
CCTACACAGGAAAAGTTGATTATCCAACAAATGGTAGGTTTTGGCGTTTTTCTCAAAACACTATGCAAAAACACATTGAT
GAAGGGCATATTTGCTTTAAAAAAGAGCATAAAGACAATGAAAGGGGCTTTATTTACAAACGCTATTTGAAAGATTTAAA
AACCACGCAAAAAACTTTTGATAGTTTAATATTTAGCGATAATTGTTACATGAATCAAACCGCAACGAAAGAGCTTTTAA
GTTTGGGAATGGGAGAGTATTTTACTTATCCAAAAGGCGTAGAATTTATGAAAAAAATCATTCTACATTCAACCACGCCA
AACTCAAACGACATCATCTTAGATTTTTTCGCCGGGAGCGGGACAACCGCGCATGCCGTGTTGGAGAGTAATAAGAGCGA
TTATCAAAAATTAAGTGAGGGGGGGGGGTCATTTAATGGCTTGAACGCTGCATTTAAAGAAAGGCAGTTCATTCTCGTCC
AATTAGATGAAAAAATTGATCCCAAGAAAAACAAAAGCGCGCATGATTTTTGTTTAAACACCCTAAAATCCACCTCCCCG
AGCATTTTTGACATCACCGAAGAAAGGATTAAAAGAGCGGGGGCCAAAATCAAAGAAGCTTGCGCGTATTTAGATGTGGG
GTTTAGAGCGTTTGAAATCATTGATGATGAAACGAACGATAAAAATCTCAATGAAGCCAATCAAAAGGATTTATTCGCTT
ATTCTAACCCAAAAAAAAGAGAAACTCAAACGATTTTAATCAAGCTTTTATGCTGCGAGAATTTAGAGCTCACCACCCCT
ATAACTTGCTTGATTGAAAACGCCTTGTATCTGGCTCAAAATACGGCTTTCATTGTGGGGGATATAGAAATGAGCGAAGT
TTTAGAAAACTTGAAAGATAAAGGGGTGGAAAAAATTAGCGTGTATATGCCAGCTATCAGTAACGATAGGCTGTGTTTGG
AATTGGGCAGTAATTTGTTGGATTTGAAATTAGAGAGTGGCGATTTAAAGATTAGGGGGTAG

Upstream 100 bases:

>100_bases
AGTGAAACGGGACTTTTTAAAAACCGCTAGCGTTTCACGGGGAACATTTGAAAATTAAGGTGGAATTGGGTAATTTAAAT
CATTTAAAAAAAGGATAGAG

Downstream 100 bases:

>100_bases
AGATGAAAATCAAATTCAAACGATTGGATTATCAAGAAAAATGCTTGAATCAAATTTTAGGGGTGTTTAAGGGGATCTAT
TTGAGAGAGCCAGAAAATGA

Product: type III DNA modification enzyme (methyltransferase)

Products: NA

Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MQNKEIYGEKSVKEKNLEVFNRYFPGCLSVENDNKLTLDVKRLKALLGDFSEIKEEGYGLDFVGKKIALNQAFKKNNKIL
KPLNESTSKHILIKGDNLDALKILKQSYSEKIKMIYIDPPYNTKNDNFIYSDDFSQSNEEILKTLDYSKEKLDYIKNLFG
SKCHSGWLSFMYPRLLLAKDLLKQDGVIFISIDDNQAAQLKLLCDEIFGERNFVADFIRKTKSTTNDAKTGVNYQHEFLF
CYAKNKEFVNLLGGEKNLENYKNPDNDPNGAWVSSDPTAKSGDIKTGYFVVKNPYTGKVDYPTNGRFWRFSQNTMQKHID
EGHICFKKEHKDNERGFIYKRYLKDLKTTQKTFDSLIFSDNCYMNQTATKELLSLGMGEYFTYPKGVEFMKKIILHSTTP
NSNDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGSFNGLNAAFKERQFILVQLDEKIDPKKNKSAHDFCLNTLKSTSP
SIFDITEERIKRAGAKIKEACAYLDVGFRAFEIIDDETNDKNLNEANQKDLFAYSNPKKRETQTILIKLLCCENLELTTP
ITCLIENALYLAQNTAFIVGDIEMSEVLENLKDKGVEKISVYMPAISNDRLCLELGSNLLDLKLESGDLKIRG

Sequences:

>Translated_633_residues
MQNKEIYGEKSVKEKNLEVFNRYFPGCLSVENDNKLTLDVKRLKALLGDFSEIKEEGYGLDFVGKKIALNQAFKKNNKIL
KPLNESTSKHILIKGDNLDALKILKQSYSEKIKMIYIDPPYNTKNDNFIYSDDFSQSNEEILKTLDYSKEKLDYIKNLFG
SKCHSGWLSFMYPRLLLAKDLLKQDGVIFISIDDNQAAQLKLLCDEIFGERNFVADFIRKTKSTTNDAKTGVNYQHEFLF
CYAKNKEFVNLLGGEKNLENYKNPDNDPNGAWVSSDPTAKSGDIKTGYFVVKNPYTGKVDYPTNGRFWRFSQNTMQKHID
EGHICFKKEHKDNERGFIYKRYLKDLKTTQKTFDSLIFSDNCYMNQTATKELLSLGMGEYFTYPKGVEFMKKIILHSTTP
NSNDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGSFNGLNAAFKERQFILVQLDEKIDPKKNKSAHDFCLNTLKSTSP
SIFDITEERIKRAGAKIKEACAYLDVGFRAFEIIDDETNDKNLNEANQKDLFAYSNPKKRETQTILIKLLCCENLELTTP
ITCLIENALYLAQNTAFIVGDIEMSEVLENLKDKGVEKISVYMPAISNDRLCLELGSNLLDLKLESGDLKIRG
>Mature_633_residues
MQNKEIYGEKSVKEKNLEVFNRYFPGCLSVENDNKLTLDVKRLKALLGDFSEIKEEGYGLDFVGKKIALNQAFKKNNKIL
KPLNESTSKHILIKGDNLDALKILKQSYSEKIKMIYIDPPYNTKNDNFIYSDDFSQSNEEILKTLDYSKEKLDYIKNLFG
SKCHSGWLSFMYPRLLLAKDLLKQDGVIFISIDDNQAAQLKLLCDEIFGERNFVADFIRKTKSTTNDAKTGVNYQHEFLF
CYAKNKEFVNLLGGEKNLENYKNPDNDPNGAWVSSDPTAKSGDIKTGYFVVKNPYTGKVDYPTNGRFWRFSQNTMQKHID
EGHICFKKEHKDNERGFIYKRYLKDLKTTQKTFDSLIFSDNCYMNQTATKELLSLGMGEYFTYPKGVEFMKKIILHSTTP
NSNDIILDFFAGSGTTAHAVLESNKSDYQKLSEGGGSFNGLNAAFKERQFILVQLDEKIDPKKNKSAHDFCLNTLKSTSP
SIFDITEERIKRAGAKIKEACAYLDVGFRAFEIIDDETNDKNLNEANQKDLFAYSNPKKRETQTILIKLLCCENLELTTP
ITCLIENALYLAQNTAFIVGDIEMSEVLENLKDKGVEKISVYMPAISNDRLCLELGSNLLDLKLESGDLKIRG

Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002941
- InterPro:   IPR002052 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 72212; Mature: 72212

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKEIYGEKSVKEKNLEVFNRYFPGCLSVENDNKLTLDVKRLKALLGDFSEIKEEGYGL
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHHHHHCCHHHHHHHCCCC
DFVGKKIALNQAFKKNNKILKPLNESTSKHILIKGDNLDALKILKQSYSEKIKMIYIDPP
CCCCHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCC
YNTKNDNFIYSDDFSQSNEEILKTLDYSKEKLDYIKNLFGSKCHSGWLSFMYPRLLLAKD
CCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLKQDGVIFISIDDNQAAQLKLLCDEIFGERNFVADFIRKTKSTTNDAKTGVNYQHEFLF
HHHHCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCEEEEE
CYAKNKEFVNLLGGEKNLENYKNPDNDPNGAWVSSDPTAKSGDIKTGYFVVKNPYTGKVD
EEECCCCHHHHCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCEECEEEEECCCCCEEC
YPTNGRFWRFSQNTMQKHIDEGHICFKKEHKDNERGFIYKRYLKDLKTTQKTFDSLIFSD
CCCCCCEEEECHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NCYMNQTATKELLSLGMGEYFTYPKGVEFMKKIILHSTTPNSNDIILDFFAGSGTTAHAV
CCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEHE
LESNKSDYQKLSEGGGSFNGLNAAFKERQFILVQLDEKIDPKKNKSAHDFCLNTLKSTSP
ECCCHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC
SIFDITEERIKRAGAKIKEACAYLDVGFRAFEIIDDETNDKNLNEANQKDLFAYSNPKKR
CEEHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCH
ETQTILIKLLCCENLELTTPITCLIENALYLAQNTAFIVGDIEMSEVLENLKDKGVEKIS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHCCCEEEE
VYMPAISNDRLCLELGSNLLDLKLESGDLKIRG
EEECCCCCCCEEHHHCCCEEEEEEECCCEEECC
>Mature Secondary Structure
MQNKEIYGEKSVKEKNLEVFNRYFPGCLSVENDNKLTLDVKRLKALLGDFSEIKEEGYGL
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHHHHHCCHHHHHHHCCCC
DFVGKKIALNQAFKKNNKILKPLNESTSKHILIKGDNLDALKILKQSYSEKIKMIYIDPP
CCCCHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCC
YNTKNDNFIYSDDFSQSNEEILKTLDYSKEKLDYIKNLFGSKCHSGWLSFMYPRLLLAKD
CCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLKQDGVIFISIDDNQAAQLKLLCDEIFGERNFVADFIRKTKSTTNDAKTGVNYQHEFLF
HHHHCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCEEEEE
CYAKNKEFVNLLGGEKNLENYKNPDNDPNGAWVSSDPTAKSGDIKTGYFVVKNPYTGKVD
EEECCCCHHHHCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCEECEEEEECCCCCEEC
YPTNGRFWRFSQNTMQKHIDEGHICFKKEHKDNERGFIYKRYLKDLKTTQKTFDSLIFSD
CCCCCCEEEECHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NCYMNQTATKELLSLGMGEYFTYPKGVEFMKKIILHSTTPNSNDIILDFFAGSGTTAHAV
CCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEHE
LESNKSDYQKLSEGGGSFNGLNAAFKERQFILVQLDEKIDPKKNKSAHDFCLNTLKSTSP
ECCCHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC
SIFDITEERIKRAGAKIKEACAYLDVGFRAFEIIDDETNDKNLNEANQKDLFAYSNPKKR
CEEHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCH
ETQTILIKLLCCENLELTTPITCLIENALYLAQNTAFIVGDIEMSEVLENLKDKGVEKIS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHCCCEEEE
VYMPAISNDRLCLELGSNLLDLKLESGDLKIRG
EEECCCCCCCEEHHHCCCEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387444; 11677609 [H]