Click here to switch to the map view.

The map label for this gene is 188528204

Identifier: 188528204

GI number: 188528204

Start: 1428489

End: 1428962

Strand: Reverse

Name: 188528204

Synonym: HPSH_07340

Alternate gene names: NA

Gene position: 1428962-1428489 (Counterclockwise)

Preceding gene: 188528209

Following gene: 188528200

Centisome position: 88.84

GC content: 27.22

Gene sequence:

>474_bases
TTGATAACGCCTTGCAAGATTTTGAGCTCTTCGGCAAGGATTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTT
TTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTT
CTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCT
CTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTT
TTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTT
CTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTTTTTCTCTTTCTGTGGGGTTATGA

Upstream 100 bases:

>100_bases
CCCATAAAGATGAGAGATCGCCTCTATTTTGAGGGATAAAACCCCCACAGCGAGCGCGAGAGTCCATTTCTTGCATTCCA
AAGAATTTTGTGCCATTTTA

Downstream 100 bases:

>100_bases
TTGTCTATATTTGCCTGATTATCTGTTAAGATTGAAAGTCCAGGTGCCTTTATCGGTTTGTATTGTTGCTTCTATAATAT
CGCACCCTCTAGAATAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MITPCKILSSSARIFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSVGL

Sequences:

>Translated_157_residues
MITPCKILSSSARIFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSVGL
>Mature_157_residues
MITPCKILSSSARIFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSVGL

Specific function: Unknown

COG id: COG1672

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16996; Mature: 16996

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPCKILSSSARIFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
CCCCHHEECCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSVGL
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MITPCKILSSSARIFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
CCCCHHEECCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFS
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
LSFSLSFSLSFSLSFSLSFSLSFSLSFSLSFSLSVGL
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA