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The map label for this gene is 188528168

Identifier: 188528168

GI number: 188528168

Start: 1386421

End: 1387083

Strand: Direct

Name: 188528168

Synonym: HPSH_07135

Alternate gene names: NA

Gene position: 1386421-1387083 (Clockwise)

Preceding gene: 188528167

Following gene: 188528169

Centisome position: 86.19

GC content: 37.1

Gene sequence:

>663_bases
ATGCGTTTAAAACATTTTAAAACTTTCCTTTTTATCACAATGGCAATTATTGTTATAGGCACCGGTTGTGCGAACAAAAA
GAAAAAAAAAGATGAATACAACAAACCGGCGATCTTTTGGTATCAAGGGATTTTGAGAGAAATCCTTTTTGCTAATTTAG
AAACAGCGGACAATTACTATTCTTCTTTACAGAGCGAACACATCAATTCCCCCCTTGTCCCAGAAGCCATGTTAGCTTTA
GGGCAAGCGCACATGAAAAAGAAAGAGTATGTTTTGGCGTCTTTTTATTTTGATGAATACATCAAGCGCTTTGGGACGAA
AGACAATGTGGATTATTTGACCTTTTTGAAATTGCAATCGCATTATTACGCTTTTAAAAACCATTCTAAAGACCAGGAAT
TTATCTCTAATTCTATTGTGAGTTTGGGCGAATTTATAGAAAAATACCCTAACAGCCGTTACCGCCCCTATGTAGAATAC
ATGCAAATCAAATTCATTTTAGGGCAAAACGAGCTCAATCGCGCGATCGCAAATGTCTATAAAAAACGCCACAAGCCTGA
GGGCGTGAAACGCTATTTAGAGAGAATAGATGAGACTTTAGAAAAAGAGACTAAACCCAAACCATCGCACATGCCTTGGT
ATGTGTTAATCTTTGATTGGTAG

Upstream 100 bases:

>100_bases
GATTGGAGAAATAGTTTTTACATTATTTGATAGGGATAAGAAAGATAAGAAAAAATAACTCATGAGTTATTCAAAAATTT
AATTTTATAAGACAGGTGGC

Downstream 100 bases:

>100_bases
GATATTTCAAACCATGCAAATTATAACAGAGAGATGAAAAATGACTGAAGATTTTCCTAAAATTCTGCCTTTATTGGTGG
AAGAAGACACCTTTTTATAC

Product: competence lipoprotein

Products: NA

Alternate protein names: Lipoprotein; TPR Repeat-Containing Protein; Outer Membrane Assembly Lipoprotein YfiO; DNA Uptake Lipoprotein-Like; Competence Lipoprotein ComL; Outer Membrane Assembly Lipoprotein Yfio; TRNA-Methyltransferase; DNA Uptake Lipoprotein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLKHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFWYQGILREILFANLETADNYYSSLQSEHINSPLVPEAMLAL
GQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEY
MQIKFILGQNELNRAIANVYKKRHKPEGVKRYLERIDETLEKETKPKPSHMPWYVLIFDW

Sequences:

>Translated_220_residues
MRLKHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFWYQGILREILFANLETADNYYSSLQSEHINSPLVPEAMLAL
GQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEY
MQIKFILGQNELNRAIANVYKKRHKPEGVKRYLERIDETLEKETKPKPSHMPWYVLIFDW
>Mature_220_residues
MRLKHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFWYQGILREILFANLETADNYYSSLQSEHINSPLVPEAMLAL
GQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEY
MQIKFILGQNELNRAIANVYKKRHKPEGVKRYLERIDETLEKETKPKPSHMPWYVLIFDW

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26257; Mature: 26257

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00055 RIBOSOMAL_S12

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFWYQGILREILFANLETADNYY
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLKLQS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
HYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNRAIANVY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
KKRHKPEGVKRYLERIDETLEKETKPKPSHMPWYVLIFDW
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRLKHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFWYQGILREILFANLETADNYY
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLKLQS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
HYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNRAIANVY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
KKRHKPEGVKRYLERIDETLEKETKPKPSHMPWYVLIFDW
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA