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The map label for this gene is ubiA

Identifier: 188528149

GI number: 188528149

Start: 1365583

End: 1366467

Strand: Reverse

Name: ubiA

Synonym: HPSH_07040

Alternate gene names: 188528149

Gene position: 1366467-1365583 (Counterclockwise)

Preceding gene: 188528150

Following gene: 188528148

Centisome position: 84.95

GC content: 40.9

Gene sequence:

>885_bases
TTGCTTAAAAAAATCACGCATCAAATCAAAGCTTTAAGCGAATTGGTCGCTTTGGAGCATACGATATTTTCTAGCATGTT
TTTACTCATGGCTATGGTCATAAGCTCCTATCAAAAAAATCAAACGCTCTTTTTTGGGTTAGAAACCTTAATCCTTTGTT
TTTTAGCCTTATTGGGGGCAAGAAACTTCGCTATGGGGTTTAACCGCTTGGTGGATAGAGATATTGATAAGGATAACCCA
AGGACGAAAAACCGCCCGAGCGTGGATGGCCGGATTAGCGTTAAAGGCATGGTGGTTTTTAGCGCTTTAAACGCTCTTTT
ATTCGTGGTGGTGAGCTATTTCATTAACCCTTTAGCTTTCAAACTTTCGTTACCTTTTTTAATCATTTTAGGGGGGTATT
CGTATTTCAAGCGCTTTTCTTCTTTGGCGCATTTTATCGTGGGTTTGGCTTTGGGTTTAGCCCCCATTGCCGGGAGTGTG
GCGGTTTTAGGGGATATTCCTTTATGGAATGTCTTTTTGGCTTTAGGGGTGATGTTATGGGTGGCTGGGTTTGATTTGCT
CTATTCTTTACAGGATATGGAGTTTGATAAAGAAAGGGGCTTGTTTTCCATCCCTAGCCAATTAGGGGAAAAATGGTGCT
TGAATCTTTCAAGGCTCTCACACCTTGTGGCGCTTGTGTGCTGGCTTTGTTTTGTGAAATGCTATCATGGGGGGCTTTTT
GCGTATTTAGGATTAGGGGTTTCAGCCTTGATTTTACTCTATGAGCAGATCTTAGTGGCTAGAGATTATAAAAACATTCC
TAAAGCCTTTTTTGTGAGTAATGGCTATTTGGGGGTGGTGTTTTTTATTTTTATTGTCCTTGATGTGGGGTTTAAGCATG
CATGA

Upstream 100 bases:

>100_bases
GTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCAATATATTATAATGCCTAGTTTAATTGTAGGTTAGAAAAGTCA
TTTTATTAGGGATCAAATAA

Downstream 100 bases:

>100_bases
GTTGGTTTTAAGATCCCAAGCTTTAGGGTTTGAAACGCGCTTAGTCCAATGCGATTTATCGTTCTCTTATGAAAGGTTCA
TCTCTAAAACCACACGCTCT

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNP
RTKNRPSVDGRISVKGMVVFSALNALLFVVVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFIVGLALGLAPIAGSV
AVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALVCWLCFVKCYHGGLF
AYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA

Sequences:

>Translated_294_residues
MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNP
RTKNRPSVDGRISVKGMVVFSALNALLFVVVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFIVGLALGLAPIAGSV
AVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALVCWLCFVKCYHGGLF
AYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA
>Mature_294_residues
MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNP
RTKNRPSVDGRISVKGMVVFSALNALLFVVVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFIVGLALGLAPIAGSV
AVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALVCWLCFVKCYHGGLF
AYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 32864; Mature: 32864

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA