| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528147
Identifier: 188528147
GI number: 188528147
Start: 1364580
End: 1365083
Strand: Reverse
Name: 188528147
Synonym: HPSH_07030
Alternate gene names: NA
Gene position: 1365083-1364580 (Counterclockwise)
Preceding gene: 188528148
Following gene: 188528146
Centisome position: 84.86
GC content: 35.12
Gene sequence:
>504_bases ATGTTATCTTCTAATGATTTGTTTATGGTCGTTTTAGGGGCGATTTTATTGGTGTTGGTGTGCTTGGTGGGGTATTTGTA TCTTAAAGAAAAAGAGTTTTACCATAAAATGAGGCGTTTAGAAAAAACCTTAGATGAATCCTATCAAGAAAATTATATCT ATTCTAAGCGTTTGAAAGAATTAGAGGGGCGTTTGGAAGGCATTTCTTTAGAAAAAAGCGCTAAAGAGGATGGCTCATTG AGAACGACTCTTTCACACCTTTATAACCAGTTGCAAGAAATCCAAAAATCCATGGATAAAGAGCGCGATTATTTAGAAGA AAAAATCATTATTTTAGAAAACAAATTCAAAGACATGGGGCATTATGCCGCTAGCGATGGGATCAATGAAAAACAGGTTT TGAAAATGTATCAAGAAGGCTATAGCGTGGATTCTATTTCTAAAGAATTTAAAGTGAGTAAGGGCGAGGTGGAGTTTGTA TTGAACATGGCAGGGTTAAAATGA
Upstream 100 bases:
>100_bases TTTAGAAATCACTCGCATGCATGCCTTAGACATTAAGCGTTATGATTCTTTCATTGTCCATAGCGAAAGGAAAGGCTTGA AATTATGAACGGGAGCAATC
Downstream 100 bases:
>100_bases TAGCTTTAAGCAACGCTCTTTCAAGGGTTTTTGGCTCTGTCGCTGGCTATGAATTCCCTTCTTTTATCCAAAAAGGCATC AACGCCCTTTATGTTAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYIYSKRLKELEGRLEGISLEKSAKEDGSL RTTLSHLYNQLQEIQKSMDKERDYLEEKIIILENKFKDMGHYAASDGINEKQVLKMYQEGYSVDSISKEFKVSKGEVEFV LNMAGLK
Sequences:
>Translated_167_residues MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYIYSKRLKELEGRLEGISLEKSAKEDGSL RTTLSHLYNQLQEIQKSMDKERDYLEEKIIILENKFKDMGHYAASDGINEKQVLKMYQEGYSVDSISKEFKVSKGEVEFV LNMAGLK >Mature_167_residues MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYIYSKRLKELEGRLEGISLEKSAKEDGSL RTTLSHLYNQLQEIQKSMDKERDYLEEKIIILENKFKDMGHYAASDGINEKQVLKMYQEGYSVDSISKEFKVSKGEVEFV LNMAGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19485; Mature: 19485
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYIYSKRLKE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGRLEGISLEKSAKEDGSLRTTLSHLYNQLQEIQKSMDKERDYLEEKIIILENKFKDMG HHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYAASDGINEKQVLKMYQEGYSVDSISKEFKVSKGEVEFVLNMAGLK HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYIYSKRLKE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGRLEGISLEKSAKEDGSLRTTLSHLYNQLQEIQKSMDKERDYLEEKIIILENKFKDMG HHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYAASDGINEKQVLKMYQEGYSVDSISKEFKVSKGEVEFVLNMAGLK HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA