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The map label for this gene is tonB [H]

Identifier: 188528130

GI number: 188528130

Start: 1346454

End: 1347308

Strand: Direct

Name: tonB [H]

Synonym: HPSH_06935

Alternate gene names: 188528130

Gene position: 1346454-1347308 (Clockwise)

Preceding gene: 188528129

Following gene: 188528156

Centisome position: 83.71

GC content: 41.64

Gene sequence:

>855_bases
ATGAAAATTTCTCCATCTCCACAGAAGCTAAGTAAAGTCTCAACGAGTGTTAGCTTTTTAATCTCTTTTGCCCTATACGC
TATAGGGTTTGGCTATTTTTTACTGCGCGAAGAGGCCCCAGCGCCTTTAGCGCAAGCTGGCACCACTAAGGTTACCATGA
GTTTAGCTAGCATTAACACTAATTCCAATACAAAGACCAATGCTGAGTCGGCTAAACCCAAAGAAGAGCCTAAAGAAAAA
CCTAAAAAAGAAGAGCCTAAAGAAAAACCTAAAAAAGAGGTTTCAAAGCCTAAGCCTAAACCCAAACCCAAGCCAAAACC
CAAGCCAAAACCTAAGCCTGAACCAAAACCCAAACCCGAGCCTGAGCCAAAACCTGAGCCTAAAGTTGAAGAGGTTAAAA
AAGAAGAGCCTAAAGAAGAGCCTAAAAAAGAAGAAGCTAAAGAGGAAGCTAAAGAAAAAAGCGCTCCTAAACAAGTAACG
ACTAAAGACATAGTCAAAGAAAAAGACAAGCAAGAAGAATCCAACAAAACCTCTGAGGGCGCCACTTCTGAAGCCCAAGC
TTATAACCCAGGCGTGAGCAACGAATTTTTAATGAAGATCCAAACCGCTATTTCTTCTAAAAACCGCTACCCTAAAATGG
CGCAGATTAGGGGCATTGAGGGCGAAGTGTTAGTGAGCTTTGTGATCAATCCTGATGGGAGCGTTACGGACATTAAAATC
GTCAAAAGCAACACGACGGATATTTTAAACCATGCGGCTTTAGAAGCTATTAAAAACGCGGCGTACTTGTTCCCTAAACC
AGAAGAAACCGTGCATTTAAAAATCCCTATCGCTTATAGTTTGAAAGAAGACTAG

Upstream 100 bases:

>100_bases
AAACAAACAGACCCTAAAACCCTTATAGACTTAAAAAGCGACAAAGGCTCTCGTTTTGAAACTTTTATCAGCATTATGGA
TATTTTAAAAGAGCATAATC

Downstream 100 bases:

>100_bases
CCAGTCTTTCTTTTGAAGGCGATTTTTAACCTTAAAAGTTGAATCAAACCCCTATTTTTCCCAACTTACAAAACAAAATC
TCTAAAATTTAAAATTAGCC

Product: siderophore-mediated iron transport protein (tonB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKISPSPQKLSKVSTSVSFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEK
PKKEEPKEKPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPEPKPEPKVEEVKKEEPKEEPKKEEAKEEAKEKSAPKQVT
TKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKI
VKSNTTDILNHAALEAIKNAAYLFPKPEETVHLKIPIAYSLKED

Sequences:

>Translated_284_residues
MKISPSPQKLSKVSTSVSFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEK
PKKEEPKEKPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPEPKPEPKVEEVKKEEPKEEPKKEEAKEEAKEKSAPKQVT
TKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKI
VKSNTTDILNHAALEAIKNAAYLFPKPEETVHLKIPIAYSLKED
>Mature_284_residues
MKISPSPQKLSKVSTSVSFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEK
PKKEEPKEKPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPEPKPEPKVEEVKKEEPKEEPKKEEAKEEAKEKSAPKQVT
TKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKI
VKSNTTDILNHAALEAIKNAAYLFPKPEETVHLKIPIAYSLKED

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 31461; Mature: 31461

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISPSPQKLSKVSTSVSFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECC
NSNTKTNAESAKPKEEPKEKPKKEEPKEKPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPE
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PEPKPEPKVEEVKKEEPKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEG
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
ATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKI
CCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEE
VKSNTTDILNHAALEAIKNAAYLFPKPEETVHLKIPIAYSLKED
EECCCHHHHHHHHHHHHHHCEEECCCCCCEEEEEEEEEECCCCC
>Mature Secondary Structure
MKISPSPQKLSKVSTSVSFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECC
NSNTKTNAESAKPKEEPKEKPKKEEPKEKPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPE
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PEPKPEPKVEEVKKEEPKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEG
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
ATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKI
CCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEE
VKSNTTDILNHAALEAIKNAAYLFPKPEETVHLKIPIAYSLKED
EECCCHHHHHHHHHHHHHHCEEECCCCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]