| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528122
Identifier: 188528122
GI number: 188528122
Start: 1341698
End: 1341811
Strand: Direct
Name: 188528122
Synonym: HPSH_06895
Alternate gene names: NA
Gene position: 1341698-1341811 (Clockwise)
Preceding gene: 188528121
Following gene: 188528123
Centisome position: 83.41
GC content: 29.82
Gene sequence:
>114_bases ATGTCAAAAAAAGTAGCTATACTTGTAGATGGAGACTTTTTTATAAGATGCTACAAATCTCATCTTAAGAAGCAGTCTGG TGACAAATATAAAGATCTTAACCCAAAAAATTAG
Upstream 100 bases:
>100_bases GAATGCAAGTACGAACCCTAGATATTTTTTATCCGTTTCTTGTCGCCCAATATTGAAAGGGTTGAAAGGGGCGGACTTTT GTACTCATTAGGATTTTAGA
Downstream 100 bases:
>100_bases CACACGATATTCATACTCATTGCCTAAGGCATATCAATAAAGAGAATGAAGAACTATACCACATATTTTTTTACGATTGC AAGCCATTAGAGAAAAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MSKKVAILVDGDFFIRCYKSHLKKQSGDKYKDLNPKN
Sequences:
>Translated_37_residues MSKKVAILVDGDFFIRCYKSHLKKQSGDKYKDLNPKN >Mature_36_residues SKKVAILVDGDFFIRCYKSHLKKQSGDKYKDLNPKN
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4316; Mature: 4185
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKVAILVDGDFFIRCYKSHLKKQSGDKYKDLNPKN CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SKKVAILVDGDFFIRCYKSHLKKQSGDKYKDLNPKN CCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA