| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528065
Identifier: 188528065
GI number: 188528065
Start: 1301291
End: 1301599
Strand: Direct
Name: 188528065
Synonym: HPSH_06610
Alternate gene names: NA
Gene position: 1301291-1301599 (Clockwise)
Preceding gene: 188528064
Following gene: 188528074
Centisome position: 80.9
GC content: 38.51
Gene sequence:
>309_bases ATGGATACCAACAAAAAAAACGCTTCTCATCTCACTCACGAAATGAAAAATAAACACGGAGGTCTTCAAACGGCAAATAA CAGGGCTGATGAACAACCTATTTTAACAGCGGTAGTGGAAGAATTGAAAACAATAGTCGGTGCAAAAGATGAGATAATTG ATGCTCAAAAAATAATTATTCAGGCTATGGAAAAAGAAAAGCAGGCTGTGGGAAGGTTGAGAACACTGGAACGCCAATTG AAAGACATACCACAATTACCTAACGACAACGACACAATAGACTTAGATCCCGAAGACGAAAAGGACTAA
Upstream 100 bases:
>100_bases TTGTGAGTAAGCCCCCTAGTTATCCAAAAATTGAACGCTATTTAAGCTAAGCCTAAGCCTATTATAATGGAGAGTTTTTA ATTAAATGTAAAGGATTTTA
Downstream 100 bases:
>100_bases GCGATCAATAGTTCTTTTTAAAATATTATAAAAAGCTTACGGCTTGGTATATGAAAATTAGCCTTTTTTATTATCAAAAT ACCCGCAATTTTAAGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDTNKKNASHLTHEMKNKHGGLQTANNRADEQPILTAVVEELKTIVGAKDEIIDAQKIIIQAMEKEKQAVGRLRTLERQL KDIPQLPNDNDTIDLDPEDEKD
Sequences:
>Translated_102_residues MDTNKKNASHLTHEMKNKHGGLQTANNRADEQPILTAVVEELKTIVGAKDEIIDAQKIIIQAMEKEKQAVGRLRTLERQL KDIPQLPNDNDTIDLDPEDEKD >Mature_102_residues MDTNKKNASHLTHEMKNKHGGLQTANNRADEQPILTAVVEELKTIVGAKDEIIDAQKIIIQAMEKEKQAVGRLRTLERQL KDIPQLPNDNDTIDLDPEDEKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11524; Mature: 11524
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNKKNASHLTHEMKNKHGGLQTANNRADEQPILTAVVEELKTIVGAKDEIIDAQKIII CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH QAMEKEKQAVGRLRTLERQLKDIPQLPNDNDTIDLDPEDEKD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MDTNKKNASHLTHEMKNKHGGLQTANNRADEQPILTAVVEELKTIVGAKDEIIDAQKIII CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH QAMEKEKQAVGRLRTLERQLKDIPQLPNDNDTIDLDPEDEKD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA