| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is secG
Identifier: 188528044
GI number: 188528044
Start: 1280392
End: 1280991
Strand: Direct
Name: secG
Synonym: HPSH_06505
Alternate gene names: 188528044
Gene position: 1280392-1280991 (Clockwise)
Preceding gene: 188528030
Following gene: 188528045
Centisome position: 79.6
GC content: 42.67
Gene sequence:
>600_bases ATGACAAGCGCTCTGTTAGGCTTACAAATTGTTTTAGCGGTATTGATTGTGGTGGTGGTTTTGTTGCAAAAAAGTTCTAG CATCGGCTTAGGGGCTTATAGTGGGAGTAATGAGTCTTTGTTTGGCGCTAAAGGGCCTGCGAGTTTTATGGCGAAATTGA CCATGTTTTTAGGGCTGTTATTTGTTGCCAACACCATCGCTTTGGGCTATTTTTACAACAAAGAATACGGCAAAAGCATT TTAGATGAAACTAAAACCAACAAAGAGCTTTCGCCCTTAGTCCCCGCCACCGGCACGCTTAACCCAACGCTTAATCCCAC ACTTAACCCGACGCTCAACCCTTTAGAGCAAGCCCTCACTAACCCTTTAATGCCCAAACAAACGCCTAACGAACTTCCTA AAGAGCCAGCCAAAACGCCTTTTATTGAAAGCCCCAAACAGAATGAAAAAAATGATGCCAATAAAGAGAATAAAGAGAAC AATATAAAGGGCGTTGAAAAAACCAAAGAGAATACAAAAACGCCCCCAACCGCCCACCAAAAGCCTAAAACGCACACGCA AACCAACGCCCATACAAACCAAAAAAAGGATGAAAAATAA
Upstream 100 bases:
>100_bases CCACGCTTGAAATTAAAACTAAATTTTAGTGTATTCTTAGCAAATTTTAGATAAGATCAAGCGTAATTTTTTCTAAATTT TAGGCAAGGAATCAGTGTTT
Downstream 100 bases:
>100_bases TGTTACAAGCCATTTATAACGAAACCAAAGATCTAATGCAAAAAAGCATTCAGGCTTTAAATAGGGATTTTTCCACTCTA AGGAGCGCGAAAGTTTCAGT
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVANTIALGYFYNKEYGKSI LDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALTNPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKEN NIKGVEKTKENTKTPPTAHQKPKTHTQTNAHTNQKKDEK
Sequences:
>Translated_199_residues MTSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVANTIALGYFYNKEYGKSI LDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALTNPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKEN NIKGVEKTKENTKTPPTAHQKPKTHTQTNAHTNQKKDEK >Mature_198_residues TSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVANTIALGYFYNKEYGKSIL DETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALTNPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKENN IKGVEKTKENTKTPPTAHQKPKTHTQTNAHTNQKKDEK
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 21652; Mature: 21521
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH FVANTIALGYFYNKEYGKSILDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALT HHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC NPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKENNIKGVEKTKENTKTPPTAHQ CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC KPKTHTQTNAHTNQKKDEK CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH FVANTIALGYFYNKEYGKSILDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALT HHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC NPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKENNIKGVEKTKENTKTPPTAHQ CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC KPKTHTQTNAHTNQKKDEK CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]