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The map label for this gene is 188528033

Identifier: 188528033

GI number: 188528033

Start: 1267314

End: 1269428

Strand: Reverse

Name: 188528033

Synonym: HPSH_06440

Alternate gene names: NA

Gene position: 1269428-1267314 (Counterclockwise)

Preceding gene: 188528034

Following gene: 188528032

Centisome position: 78.92

GC content: 44.35

Gene sequence:

>2115_bases
ATGAAAAAAACCCTTTTACTCTCTCTCTCGTTTTTGCTCCACGCTGAAGACGACGGCTTTTACATGAGCGCAGGCTATCA
AATCGGTGAAGCCGCTCAAATGGTGAGCAACACCAAAGGCATCCAACAGCTTTCAGACAACTATGAAAACTTGAGCAAGC
TTTTAACCAGATACAGCACCTTAACCAACCTTATCCGATTGTCCTCTGATCCGAGCACGATTAACGAAGTAAGGGATAAT
CTAGGCTCAAGCTCTAGGAATTTGCTTGATGTCAAAACCAATTCTCCGGCGTATCAAGCCGTGCTTTTAGCATTGAACGC
TGCAGTGGGGTTGTGGCAAGTTACAAGCTATGCTTTTACTGCTTGTGGTCCTGGCGAGAAAGAGAACGAAAATGGAGGTA
TCCAAACTTTTAATAATGTGCCAGGACAAGATACGACGACCATCACTTGTAATTCGTATTACCAACCAGGACATGGTGGG
CCTATATCCACTGCAAATTACGCGAAAATCAATCAAGCCTATCAAATCATTCAAAAGGCTTTGACAGCGAATGGATCTGA
TGGAGATGGGGTTCCCGTTTTAAGCAACACCACTACAAAACTTGATTTCACTATCAATGGAGACAAAAGAACGGGTGGCA
AACCAAATGAACCTTTAGTATACCAATGGAGTCATGGGAAACCTATTTCAACCTCGTGGGTTGATACAACAGCAACAAGC
ACAACAGAAACCATCAATACAACCAATAACGCTCAAGAGCTTTTAAAACAAGCGAGCGTCATTATCACTACCTTAAATGA
GGCATGCCCAAACTTCCAGAATGGTGGTAGCAGGTATTGGCCAGGGATAAGTGGCAATGGGACAATGTGCGGGATGTTTG
CCAATGAAATCAGCGCTATCCAAGGCATGATCGCTAATGCGCAAGAAGCTGTCGCACAAGCCAAAATCGTTAGTGAAAAC
ACGCAAAATCAGAGCAACCTAGACACTGCAAAACCATTCAACCCCTACACAGACGCTAGCTTTGCGCAAGGCATGCTCGC
TAACGCTCAAGCTCAAGCGGAGATTTTAAACCAAGCCGAACAAGTGGTGAAAAACTTTGAAAAAATCCCTACAGCCTTTG
TAAATGGCTCTTTAGGGGTGTGTTATCAAATGGAAGGCGGTGAGCGTAGGGGCACCAATCCAGGTCAGACAACTACTAAC
ACTTGGGGGGCCGGTTGTGCCTATGTGGAACAAACCATAACGAATTTAAGCAACAGCATCGCTCATTTTGGCACTCAAGA
GCAGCAAATAGAGCAAGCAGAAAACATCGCTGACACTCTAGTGCATTTCAAATCTAGATACAGCGAATTGGGCAACACTT
ATAACAGCATCACCACCGCGCTCTCCAAAGTCCCTAACGCTCAATCTTTGCAAAATGTGGTGAGCAAAAAGAACAACCCC
TATAGCCCGCAAGGCATAGAAACCAATTACTACCTCAATCAAAACTCTTACAACCAAGTCCAAACCATCAACCAAGAGCT
AGGGCGTAACCCCTTTAGGAAATTGGGCATCGTCAGCTCTCAAACCAACAACGGCGCGATGAATGGGATCGGTATTCAAG
TGGGTTACAAACAATTCTTTGGCCAAAAAAGAAAGTGGGGCGCTAGGTATTACGGCTTTTTTGACTACAACCATGCGTTC
ATCAAATCCAGCTTTTTCAACTCGGCTTCTGATGTATGGACTTATGGTTTTGGAGCGGACGCTCTTTATAACTTCATCAA
CGATAAAGCCACCAATTTCTTAGGCAAAAACAACAAGCTTTCTGTGGGGCTTTTTGGCGGGATTGCGTTAGCGGGCACTT
CATGGCTTAATTCTGAGTATGTGAATTTAGCCACCGTGAATAATGTCTATAACGCTAAAATGAATGTGGCGAACTTCCAA
TTCTTATTCAACATGGGCGTGAGAATGAATCTCGCCAGGTCTAAGAAAAAAGGCAGCGATCATGCCGCTCAGCATGGCAT
TGAACTAGGCGTGAAAATCCCCACCATCAACACGAATTACTATTCCTTTATGGGGGCTGAACTCAAATACCGCAGACTCT
ATAGCGTGTATTTGAACTATGTGTTCGCTTATTAA

Upstream 100 bases:

>100_bases
CTTATCAATTCATGCTACATTAACGAAATCTTGTGGTAGGATTTCATGCTTTTATAGGACTTAGGATTTACCTAACAATT
CAATTTAAAAAGGAGAAAAC

Downstream 100 bases:

>100_bases
TGTTTGGCTCTTTGTAAAACTCCCTTTTTAGGGGATTTCTTTAAAGCTTTTCTTTTTAAAGTCTTTTTAAACCCTCTTTT
TTTTTGGGGGGGTTTGATCT

Product: outer membrane protein (omp19)

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MKKTLLLSLSFLLHAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYSTLTNLIRLSSDPSTINEVRDN
LGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFTACGPGEKENENGGIQTFNNVPGQDTTTITCNSYYQPGHGG
PISTANYAKINQAYQIIQKALTANGSDGDGVPVLSNTTTKLDFTINGDKRTGGKPNEPLVYQWSHGKPISTSWVDTTATS
TTETINTTNNAQELLKQASVIITTLNEACPNFQNGGSRYWPGISGNGTMCGMFANEISAIQGMIANAQEAVAQAKIVSEN
TQNQSNLDTAKPFNPYTDASFAQGMLANAQAQAEILNQAEQVVKNFEKIPTAFVNGSLGVCYQMEGGERRGTNPGQTTTN
TWGAGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLVHFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNP
YSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQ
FLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY

Sequences:

>Translated_704_residues
MKKTLLLSLSFLLHAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYSTLTNLIRLSSDPSTINEVRDN
LGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFTACGPGEKENENGGIQTFNNVPGQDTTTITCNSYYQPGHGG
PISTANYAKINQAYQIIQKALTANGSDGDGVPVLSNTTTKLDFTINGDKRTGGKPNEPLVYQWSHGKPISTSWVDTTATS
TTETINTTNNAQELLKQASVIITTLNEACPNFQNGGSRYWPGISGNGTMCGMFANEISAIQGMIANAQEAVAQAKIVSEN
TQNQSNLDTAKPFNPYTDASFAQGMLANAQAQAEILNQAEQVVKNFEKIPTAFVNGSLGVCYQMEGGERRGTNPGQTTTN
TWGAGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLVHFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNP
YSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQ
FLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
>Mature_704_residues
MKKTLLLSLSFLLHAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYSTLTNLIRLSSDPSTINEVRDN
LGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFTACGPGEKENENGGIQTFNNVPGQDTTTITCNSYYQPGHGG
PISTANYAKINQAYQIIQKALTANGSDGDGVPVLSNTTTKLDFTINGDKRTGGKPNEPLVYQWSHGKPISTSWVDTTATS
TTETINTTNNAQELLKQASVIITTLNEACPNFQNGGSRYWPGISGNGTMCGMFANEISAIQGMIANAQEAVAQAKIVSEN
TQNQSNLDTAKPFNPYTDASFAQGMLANAQAQAEILNQAEQVVKNFEKIPTAFVNGSLGVCYQMEGGERRGTNPGQTTTN
TWGAGCAYVEQTITNLSNSIAHFGTQEQQIEQAENIADTLVHFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNP
YSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQ
FLFNMGVRMNLARSKKKGSDHAAQHGIELGVKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77077; Mature: 77077

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLLSLSFLLHAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYST
CCCEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNLIRLSSDPSTINEVRDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFT
HHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEE
ACGPGEKENENGGIQTFNNVPGQDTTTITCNSYYQPGHGGPISTANYAKINQAYQIIQKA
ECCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LTANGSDGDGVPVLSNTTTKLDFTINGDKRTGGKPNEPLVYQWSHGKPISTSWVDTTATS
HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
TTETINTTNNAQELLKQASVIITTLNEACPNFQNGGSRYWPGISGNGTMCGMFANEISAI
CCCEECCCHHHHHHHHHHHHHEEEHHHHCCCCCCCCCEECCCCCCCCCEEHHHHHHHHHH
QGMIANAQEAVAQAKIVSENTQNQSNLDTAKPFNPYTDASFAQGMLANAQAQAEILNQAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHH
QVVKNFEKIPTAFVNGSLGVCYQMEGGERRGTNPGQTTTNTWGAGCAYVEQTITNLSNSI
HHHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AHFGTQEQQIEQAENIADTLVHFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC
YSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFF
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCCEECCCCCCCCCCEEEEECHHHHC
GQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKL
CCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCE
SVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSD
EEEEECCHHHHCCHHCCCCCEEEEEECCHHCCEECHHHEEEEECCCCEEEHHHHCCCCCH
HAAQHGIELGVKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
HHHHCCCEEEEEECEECCCHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTLLLSLSFLLHAEDDGFYMSAGYQIGEAAQMVSNTKGIQQLSDNYENLSKLLTRYST
CCCEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNLIRLSSDPSTINEVRDNLGSSSRNLLDVKTNSPAYQAVLLALNAAVGLWQVTSYAFT
HHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEE
ACGPGEKENENGGIQTFNNVPGQDTTTITCNSYYQPGHGGPISTANYAKINQAYQIIQKA
ECCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LTANGSDGDGVPVLSNTTTKLDFTINGDKRTGGKPNEPLVYQWSHGKPISTSWVDTTATS
HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
TTETINTTNNAQELLKQASVIITTLNEACPNFQNGGSRYWPGISGNGTMCGMFANEISAI
CCCEECCCHHHHHHHHHHHHHEEEHHHHCCCCCCCCCEECCCCCCCCCEEHHHHHHHHHH
QGMIANAQEAVAQAKIVSENTQNQSNLDTAKPFNPYTDASFAQGMLANAQAQAEILNQAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHH
QVVKNFEKIPTAFVNGSLGVCYQMEGGERRGTNPGQTTTNTWGAGCAYVEQTITNLSNSI
HHHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AHFGTQEQQIEQAENIADTLVHFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC
YSPQGIETNYYLNQNSYNQVQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFF
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCCEECCCCCCCCCCEEEEECHHHHC
GQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKL
CCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCE
SVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSD
EEEEECCHHHHCCHHCCCCCEEEEEECCHHCCEECHHHEEEEECCCCEEEHHHHCCCCCH
HAAQHGIELGVKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
HHHHCCCEEEEEECEECCCHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA