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The map label for this gene is 188528004

Identifier: 188528004

GI number: 188528004

Start: 1243420

End: 1243899

Strand: Reverse

Name: 188528004

Synonym: HPSH_06295

Alternate gene names: NA

Gene position: 1243899-1243420 (Counterclockwise)

Preceding gene: 188528005

Following gene: 188528003

Centisome position: 77.33

GC content: 37.5

Gene sequence:

>480_bases
ATGCGCTCTCCAAATTTAGAAAAAGAAGAAACTGAAATCATAGAAACACTCCTTATGCGTGAAAAAATGCGTTTATGCCC
CTTGTATTGGCGCATCTTAGCGTTTTTAACCGATGGTTTGTTGGTAGCGTTTTTATTGAGCGATCTTTTAAGGGCGTGCG
ATTTCTTGCATTCTTTATACTGGCTGGCTAACCCCATTTATCACAGTGCGTTTGTTGCGATGGGTTTTATCATCTTGTAT
GGCGTTTATGAAATCTTTTTTGTGTGTTTGTGCAAGATGAGTTTGGCTAAACTGGTTTTTAGGATTAAGATTATTGATAT
TTATTTAGCGGATTGCCCCAGTAGGGCTATTTTATTGAAGCGTTTAGGGTTAAAGATCGTGGTTTTTCTATGCCCCTTTT
TATGGTTTGTAGTGTTTAAAAACCCCTATCATAGGGCGTGGCATGAAGAAAAAAGCAAAAGTCTTTTGGTGTTAGTTTAA

Upstream 100 bases:

>100_bases
GCATGTTTTATCGCAAAGATATTGGTTTTAAGGTGTTAGATCTGAAAGAATACTCTTGAAGTTTAAGACAAACCAAAGAG
TTTGTCTTGTTTGTTTTTGA

Downstream 100 bases:

>100_bases
TCATGATTTATTGGTTGTATTTGGCGGTCTTTTTTTTGTTGAGCGCATTAGACGCTAAAGAAATCGCTATGCAACGATTT
GACAAACAAAACCATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLRACDFLHSLYWLANPIYHSAFVAMGFIILY
GVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLV

Sequences:

>Translated_159_residues
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLRACDFLHSLYWLANPIYHSAFVAMGFIILY
GVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLV
>Mature_159_residues
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLRACDFLHSLYWLANPIYHSAFVAMGFIILY
GVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLV

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18740; Mature: 18740

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLRACDFLHSLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLANPIYHSAFVAMGFIILYGVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLRACDFLHSLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLANPIYHSAFVAMGFIILYGVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA