| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is cysE [H]
Identifier: 188527998
GI number: 188527998
Start: 1236745
End: 1237260
Strand: Reverse
Name: cysE [H]
Synonym: HPSH_06265
Alternate gene names: 188527998
Gene position: 1237260-1236745 (Counterclockwise)
Preceding gene: 188527999
Following gene: 188527997
Centisome position: 76.92
GC content: 50.39
Gene sequence:
>516_bases ATGCTGGATTTGTCTTATAGCCTGGAGCGTGTTTTGCAAGAAGACCCGGCAGCTAGGAATAAGTGGGAGATTCTTTTGCT TTATCCAGGCATTCATGCACTGCTTTGCCACCGCCTAGCGCATGCGTTGCATAAGAAAGGGTTTTATTTTATTGCGCGCG CGCTTTCTCAGTTAGCGCGCTTTATTACCGGGATAGAAATCCACCCAGGTGCTAAGATTGGGAGAGGGCTTTTTATTGAC CATGGCATGGGTGTGGTGATTGGCGAGACCACAGAGATTGGAGATGATGTTACCATTTATCATGGCGTAACTTTAGGGGG CACGGGCAAGTTCAAGGGCAAGCGCCACCCCACTTTAGGCAACCGAGTGGTAGTGGGGGCTGGGGCTAAGGTCTTGGGCG CGATTTGCGTGGGTGATGATGTGAAGATTGGGGCTAATGCGGTGGTGCTTTCAGATTTACCCACAGGTTCTACGGCTGTA GGCGCTAAAGCTAAGACCATCACAAAGGATCGTTAA
Upstream 100 bases:
>100_bases AAGCTTCTTTCTTTAGAAAGGGGCGCTCTCACTGGAATGGATGAGAAAAAATCTGCTTAAGTCATGTTGATTCAAATATA TTTCAACCGGAGTCTCTATC
Downstream 100 bases:
>100_bases TTTTAGATAAGCGGTTGGAGTTTATGCCGTGCGGGTTTATTTTGAGGTAAATTGGTTAATAAGACTGATTTTATGAGAGT TAAGCGAGTTTGTTGTTAAG
Product: serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MLDLSYSLERVLQEDPAARNKWEILLLYPGIHALLCHRLAHALHKKGFYFIARALSQLARFITGIEIHPGAKIGRGLFID HGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAV GAKAKTITKDR
Sequences:
>Translated_171_residues MLDLSYSLERVLQEDPAARNKWEILLLYPGIHALLCHRLAHALHKKGFYFIARALSQLARFITGIEIHPGAKIGRGLFID HGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAV GAKAKTITKDR >Mature_171_residues MLDLSYSLERVLQEDPAARNKWEILLLYPGIHALLCHRLAHALHKKGFYFIARALSQLARFITGIEIHPGAKIGRGLFID HGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAV GAKAKTITKDR
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=163, Percent_Identity=45.398773006135, Blast_Score=130, Evalue=4e-32, Organism=Escherichia coli, GI1788371, Length=164, Percent_Identity=39.0243902439024, Blast_Score=80, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 18188; Mature: 18188
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLSYSLERVLQEDPAARNKWEILLLYPGIHALLCHRLAHALHKKGFYFIARALSQLAR CCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLG HHHCCEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC NRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAVGAKAKTITKDR CEEEEECCHHHEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDLSYSLERVLQEDPAARNKWEILLLYPGIHALLCHRLAHALHKKGFYFIARALSQLAR CCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLG HHHCCEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC NRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAVGAKAKTITKDR CEEEEECCHHHEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]