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The map label for this gene is yckA [H]

Identifier: 188527955

GI number: 188527955

Start: 1189363

End: 1190034

Strand: Direct

Name: yckA [H]

Synonym: HPSH_06050

Alternate gene names: 188527955

Gene position: 1189363-1190034 (Clockwise)

Preceding gene: 188527954

Following gene: 188527956

Centisome position: 73.94

GC content: 40.33

Gene sequence:

>672_bases
ATGGGAGTTTTACTAGAGTTAGACAACCTTAAGCGCTTGTTAGAAGGGTTTGAAACCACCCTTTTAATCGCTCTTAGCTC
TGCGGTTATTTCAATCGTTGTTGGGATACTTTTGGGGAGCTTGATGGCGTTTGGTTCTAAAATAGTGGTTTTGGCGTGTC
GTGTGTATTTAGAAAGCATTCGCATCATCCCGCTTTTAGCATGGCTTTTTATCGTGTATTTCGGGTTAGCGAGCTGGTTT
GATTTGCATATTAGCGCTGTTTTGGCGAGCGTGATTGTTTTTAGCTTGTGGGGTGGCGCTGAAATGATGGATTTAACCAG
AGGGGTTTTAACTTCCGTGAGCAAACACCAAGTAGAAAGCGCTCTGGCTTTAGGCATGGATTCAAAAAGGGTGATTTTTA
ACATTATTTTCCCCCAAAGCTTTTTGTCTTTATTGCCCTCAAGCCTTAATTTATTCACGCGCATGATTAAAACCACGGCT
TTAGTTTCTCTCATTGGAGCGATTGATTTGTTAAAAGTGGGCCAGCAAATCATAGAGCTTAACCTCTTACGCATGCCCAA
TGCGAGCTTTGTGGTTTATGGCGTTATCTTAATGTTTTATTTTAGTTTATGCTATAGTTTGAGCCTGTATAGTTCCTATT
TAGAAAAAAAATTCCAACACATTAGAGGGTAA

Upstream 100 bases:

>100_bases
GCCTTTTGATGTTAAGCGTTGCTTATTTGATCGCTTTGCTCCCTTTAAGCGTTTTGTTTGTGATCTTAGAGCGTTTCTTT
AAAAAGAAAGTGGCTTAAAA

Downstream 100 bases:

>100_bases
AATGAGCGTGATTTTAGAAACCAAAGGGTTAAAAAAAACCTATCAAAACCATTTGGTTTTAGACGGCATCAATTTCACTT
TAAATAAGGGTGAAGTGGCA

Product: glutamine ABC transporter, permease protein (glnP)

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MGVLLELDNLKRLLEGFETTLLIALSSAVISIVVGILLGSLMAFGSKIVVLACRVYLESIRIIPLLAWLFIVYFGLASWF
DLHISAVLASVIVFSLWGGAEMMDLTRGVLTSVSKHQVESALALGMDSKRVIFNIIFPQSFLSLLPSSLNLFTRMIKTTA
LVSLIGAIDLLKVGQQIIELNLLRMPNASFVVYGVILMFYFSLCYSLSLYSSYLEKKFQHIRG

Sequences:

>Translated_223_residues
MGVLLELDNLKRLLEGFETTLLIALSSAVISIVVGILLGSLMAFGSKIVVLACRVYLESIRIIPLLAWLFIVYFGLASWF
DLHISAVLASVIVFSLWGGAEMMDLTRGVLTSVSKHQVESALALGMDSKRVIFNIIFPQSFLSLLPSSLNLFTRMIKTTA
LVSLIGAIDLLKVGQQIIELNLLRMPNASFVVYGVILMFYFSLCYSLSLYSSYLEKKFQHIRG
>Mature_222_residues
GVLLELDNLKRLLEGFETTLLIALSSAVISIVVGILLGSLMAFGSKIVVLACRVYLESIRIIPLLAWLFIVYFGLASWFD
LHISAVLASVIVFSLWGGAEMMDLTRGVLTSVSKHQVESALALGMDSKRVIFNIIFPQSFLSLLPSSLNLFTRMIKTTAL
VSLIGAIDLLKVGQQIIELNLLRMPNASFVVYGVILMFYFSLCYSLSLYSSYLEKKFQHIRG

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=30.2884615384615, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=25.6880733944954, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI87082239, Length=222, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788646, Length=173, Percent_Identity=27.7456647398844, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786873, Length=221, Percent_Identity=26.2443438914027, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24720; Mature: 24589

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLLELDNLKRLLEGFETTLLIALSSAVISIVVGILLGSLMAFGSKIVVLACRVYLESI
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RIIPLLAWLFIVYFGLASWFDLHISAVLASVIVFSLWGGAEMMDLTRGVLTSVSKHQVES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALALGMDSKRVIFNIIFPQSFLSLLPSSLNLFTRMIKTTALVSLIGAIDLLKVGQQIIEL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLRMPNASFVVYGVILMFYFSLCYSLSLYSSYLEKKFQHIRG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVLLELDNLKRLLEGFETTLLIALSSAVISIVVGILLGSLMAFGSKIVVLACRVYLESI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RIIPLLAWLFIVYFGLASWFDLHISAVLASVIVFSLWGGAEMMDLTRGVLTSVSKHQVES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALALGMDSKRVIFNIIFPQSFLSLLPSSLNLFTRMIKTTALVSLIGAIDLLKVGQQIIEL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLRMPNASFVVYGVILMFYFSLCYSLSLYSSYLEKKFQHIRG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377 [H]