| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527947
Identifier: 188527947
GI number: 188527947
Start: 1180384
End: 1180575
Strand: Direct
Name: 188527947
Synonym: HPSH_06000
Alternate gene names: NA
Gene position: 1180384-1180575 (Clockwise)
Preceding gene: 188527943
Following gene: 188527948
Centisome position: 73.38
GC content: 37.5
Gene sequence:
>192_bases ATGAATACAGAAATTTTAACCATCATGTTAGTTGTCTCAGTGCTTATGGGATTGATAGGCTTAATAGCGTTTTTATGGGG GGTTAAAAGCGGTCAGTTTGATGATGAAAAACGCATGCTTGAAAGCGTGTTGTATGACAGCGCAAGCGATTTGAACGAAG CAATTTTACAAGAAAAACGCCAAGAGAATTAA
Upstream 100 bases:
>100_bases CTCATTTTCATGTTATCCAAACTTATTCAACCTATTGGTGATTTAAACGCTATCTTTTAGTATAATGACAGCGTTATCCT AATAACCTAAAAGAATAGAG
Downstream 100 bases:
>100_bases AAAGAATTAAAATAAAAGGATAGGAATGAACCAAGAAATTTTAGATGTGTTGATAGTGGGCGCAGGGCCTGGGGGCATTG CCACAGCCGTAGAATGCGAA
Product: cation transport subunit for cbb3-type oxidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MNTEILTIMLVVSVLMGLIGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQEN
Sequences:
>Translated_63_residues MNTEILTIMLVVSVLMGLIGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQEN >Mature_63_residues MNTEILTIMLVVSVLMGLIGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQEN
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7117; Mature: 7117
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTEILTIMLVVSVLMGLIGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QEN CCC >Mature Secondary Structure MNTEILTIMLVVSVLMGLIGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QEN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA