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The map label for this gene is 188527940

Identifier: 188527940

GI number: 188527940

Start: 1171417

End: 1173507

Strand: Direct

Name: 188527940

Synonym: HPSH_05965

Alternate gene names: NA

Gene position: 1171417-1173507 (Clockwise)

Preceding gene: 188527939

Following gene: 188527941

Centisome position: 72.82

GC content: 42.61

Gene sequence:

>2091_bases
TTGCAAGACTTTATTTTTAATAAAAAATGGCTTATCTATTCTAGCCTACTCCCCTTATTTTTTCTTAATCCCTTAGCGGC
TGAAGATGATGGGTTTTTTATGGGGGTGAGTTATCAAACTTCTTTAGCCATTCAAAGGGTGGATAACTCAGGGCTTAACG
CCAGTCAAGACGCATCCACCTACATCCGCCAAAACGCTATCGCTCTAGAATCTGCGGCAGTGCCTTTAGCCTATTATTTA
GAAGCGATGGGGCAACAAACTAGAGTTTTAATGCAAATGCTCTGCCCTGATCCTTCTAAAAGGTGTTTGCTCTATGCGGG
GGGCTATCCTAAAGAAAGTAATGGCGGTACAGGCAACAACCCCCCAAGAGGCAATGTCAATGCCACCTTTGATATGCAAT
CTCTAGTCAGTAATTTAGACAAGCTCACCCAACTCATCGGCGAAACTTTAATCCGTAACCCTGAAAATCTTTCTAACGCT
AAACTCGTTGAAGTCAAATTCGGCAATCAAAGCACTGTTATTGCCTTGCCTAGTGGTCTAGCCAGTGTCATGAACGCTTT
AAACGATGATATTACCAACGCTTTAACCACGCTTTGGTATAACCAAACCTTAACGAATAAATCTTTTAGCACCCCTGATG
GCAGTCCTGTGAGTTTTAGCCCTAAAGTCTTGCAACACCTTTTACAAGACGGCTTAGCCACAGCAAGCAGTAACCAAACC
ATTTGCAGCACTCAAAACCAATGCACCGCTACTAATGAAGCTAACTCTATCGCTCAAAACGCCCAAAACATCTTCCAGGC
TTTAATGCAAGCAGGGATTTTAGGGGGCTTAGCCAATGAAAAGCAATTTGGCTTCACTTACAATAAAGCCCCTAATGGCA
GCAATTCCCAACAAGGCTACCAAAGCTTTAGCGGCCCGGGTTATTACACCAAAAACGGCAATACTAACGGCACGCAAGCG
CCCTTAAAAGAATTGCCCGCTGGAGCGACGGTTGGATCAGGCAATGGCCAATACACCTACCACCCTAGCTCGGCAGTCTA
TTATTTAGCTGATAGCATCATCGCTAATGGCATCACCGCTTCTATGATTTTTTCAGGCATGCAAAATTTCGCCAATAAAG
TCGCTAAACTGACAGGCACTTCAAGCTATAGCCAGATGCAAGAAGCGATCAACTATGGACAAAGCTTGCTTAGTAACACC
GTAGCGTATGGGAACTTTATCACCAATTGGGTCGCCCCCTATTTGGATTTAAATAATAAAGGTTTGAATTTCTTGCCTAG
CTATGGAGGAAAAGCTAATACCAATAATGTAACCCCTAATTTAACCCCGCAACAAGCCCAACAAGAGCAAAAAGTCATCA
TGAACCAACTAGAGCAAGCCACAAACGCCCCCACCCCTGCGCAAATAGACAAGATCTTAGCCAACCCCTATTCCCCCACG
GCAAAAACTTTAATGGCTTATGGGCTTTATCGCTCTACAAAAGTGATTGGCGGGGTGATTGATGAAATGCAAACTAAAGT
GAATCAAGTCTATCAAATGGGCTTTGCTAGGAATTTTTTGGAGCATAACTCTAATTCTAATAACATGAACGGCTTTGGCG
TGAAAATGGGCTATAAGCAATTCTTTGGCAAAAAGCGCATGTTTGGGCTTAGGTATTATGGCTTTTATGATTTTGGTTAC
GCGCAATTTGGTGCAGGATCTTCTTTAGTGAAAGCCACTCTCTCTAGCTATGGGGCAGGCACAGACTTTCTTTATAATGT
TTTTACCCGAAAAAGGGGGACTGAAGCGATAGATATAGGTTTTTTTGCCGGCATCCAACTTGCAGGGCAAACCTGGAAAA
CGAATTTTTTAGATCAAGTGGATGGCAACCATCTTAAACCCAAAGACACTTCTTTCCAATTCCTTTTTGATTTAGGCATA
AGGACTAATTTTTCCAAAATCGCCAAGCAAAGAAGATCTCGTTTTTCTCAAGGGATAGAATTTGGCGTTAAAATACCGGT
GCTTTATCACACCTATTACCAATCAGAAGGCGTTACAGCGAAATATAGAAGAGCCTTTAGTTTTTATGTGGGCTACAGTA
TAGGCTTTTGA

Upstream 100 bases:

>100_bases
CATTTTAATCAACAATTAAGCGACCAACCATTAAACTTAAGCGATAAATAAGATAAAATTTAGGATAACTCAAATCTTTT
AAAAAGAAAAGGATAACCCC

Downstream 100 bases:

>100_bases
TTAAATAAAATAAGGGAAAAATATGATAAAAAAAGCTAAAAAATTTATACCATTCTTTTTAATTGGCTCTCTCTTAGCTG
AAGACAATGGCTGGTATATG

Product: outer membrane protein HopI

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HorA; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Adhesin; Outer Membrane Protein HopB; Outer Membrane Protein HopE; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 696; Mature: 696

Protein sequence:

>696_residues
MQDFIFNKKWLIYSSLLPLFFLNPLAAEDDGFFMGVSYQTSLAIQRVDNSGLNASQDASTYIRQNAIALESAAVPLAYYL
EAMGQQTRVLMQMLCPDPSKRCLLYAGGYPKESNGGTGNNPPRGNVNATFDMQSLVSNLDKLTQLIGETLIRNPENLSNA
KLVEVKFGNQSTVIALPSGLASVMNALNDDITNALTTLWYNQTLTNKSFSTPDGSPVSFSPKVLQHLLQDGLATASSNQT
ICSTQNQCTATNEANSIAQNAQNIFQALMQAGILGGLANEKQFGFTYNKAPNGSNSQQGYQSFSGPGYYTKNGNTNGTQA
PLKELPAGATVGSGNGQYTYHPSSAVYYLADSIIANGITASMIFSGMQNFANKVAKLTGTSSYSQMQEAINYGQSLLSNT
VAYGNFITNWVAPYLDLNNKGLNFLPSYGGKANTNNVTPNLTPQQAQQEQKVIMNQLEQATNAPTPAQIDKILANPYSPT
AKTLMAYGLYRSTKVIGGVIDEMQTKVNQVYQMGFARNFLEHNSNSNNMNGFGVKMGYKQFFGKKRMFGLRYYGFYDFGY
AQFGAGSSLVKATLSSYGAGTDFLYNVFTRKRGTEAIDIGFFAGIQLAGQTWKTNFLDQVDGNHLKPKDTSFQFLFDLGI
RTNFSKIAKQRRSRFSQGIEFGVKIPVLYHTYYQSEGVTAKYRRAFSFYVGYSIGF

Sequences:

>Translated_696_residues
MQDFIFNKKWLIYSSLLPLFFLNPLAAEDDGFFMGVSYQTSLAIQRVDNSGLNASQDASTYIRQNAIALESAAVPLAYYL
EAMGQQTRVLMQMLCPDPSKRCLLYAGGYPKESNGGTGNNPPRGNVNATFDMQSLVSNLDKLTQLIGETLIRNPENLSNA
KLVEVKFGNQSTVIALPSGLASVMNALNDDITNALTTLWYNQTLTNKSFSTPDGSPVSFSPKVLQHLLQDGLATASSNQT
ICSTQNQCTATNEANSIAQNAQNIFQALMQAGILGGLANEKQFGFTYNKAPNGSNSQQGYQSFSGPGYYTKNGNTNGTQA
PLKELPAGATVGSGNGQYTYHPSSAVYYLADSIIANGITASMIFSGMQNFANKVAKLTGTSSYSQMQEAINYGQSLLSNT
VAYGNFITNWVAPYLDLNNKGLNFLPSYGGKANTNNVTPNLTPQQAQQEQKVIMNQLEQATNAPTPAQIDKILANPYSPT
AKTLMAYGLYRSTKVIGGVIDEMQTKVNQVYQMGFARNFLEHNSNSNNMNGFGVKMGYKQFFGKKRMFGLRYYGFYDFGY
AQFGAGSSLVKATLSSYGAGTDFLYNVFTRKRGTEAIDIGFFAGIQLAGQTWKTNFLDQVDGNHLKPKDTSFQFLFDLGI
RTNFSKIAKQRRSRFSQGIEFGVKIPVLYHTYYQSEGVTAKYRRAFSFYVGYSIGF
>Mature_696_residues
MQDFIFNKKWLIYSSLLPLFFLNPLAAEDDGFFMGVSYQTSLAIQRVDNSGLNASQDASTYIRQNAIALESAAVPLAYYL
EAMGQQTRVLMQMLCPDPSKRCLLYAGGYPKESNGGTGNNPPRGNVNATFDMQSLVSNLDKLTQLIGETLIRNPENLSNA
KLVEVKFGNQSTVIALPSGLASVMNALNDDITNALTTLWYNQTLTNKSFSTPDGSPVSFSPKVLQHLLQDGLATASSNQT
ICSTQNQCTATNEANSIAQNAQNIFQALMQAGILGGLANEKQFGFTYNKAPNGSNSQQGYQSFSGPGYYTKNGNTNGTQA
PLKELPAGATVGSGNGQYTYHPSSAVYYLADSIIANGITASMIFSGMQNFANKVAKLTGTSSYSQMQEAINYGQSLLSNT
VAYGNFITNWVAPYLDLNNKGLNFLPSYGGKANTNNVTPNLTPQQAQQEQKVIMNQLEQATNAPTPAQIDKILANPYSPT
AKTLMAYGLYRSTKVIGGVIDEMQTKVNQVYQMGFARNFLEHNSNSNNMNGFGVKMGYKQFFGKKRMFGLRYYGFYDFGY
AQFGAGSSLVKATLSSYGAGTDFLYNVFTRKRGTEAIDIGFFAGIQLAGQTWKTNFLDQVDGNHLKPKDTSFQFLFDLGI
RTNFSKIAKQRRSRFSQGIEFGVKIPVLYHTYYQSEGVTAKYRRAFSFYVGYSIGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76271; Mature: 76271

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFIFNKKWLIYSSLLPLFFLNPLAAEDDGFFMGVSYQTSLAIQRVDNSGLNASQDAST
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHEEECCCCCCCCCHHHHH
YIRQNAIALESAAVPLAYYLEAMGQQTRVLMQMLCPDPSKRCLLYAGGYPKESNGGTGNN
HHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC
PPRGNVNATFDMQSLVSNLDKLTQLIGETLIRNPENLSNAKLVEVKFGNQSTVIALPSGL
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCHHH
ASVMNALNDDITNALTTLWYNQTLTNKSFSTPDGSPVSFSPKVLQHLLQDGLATASSNQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
ICSTQNQCTATNEANSIAQNAQNIFQALMQAGILGGLANEKQFGFTYNKAPNGSNSQQGY
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHH
QSFSGPGYYTKNGNTNGTQAPLKELPAGATVGSGNGQYTYHPSSAVYYLADSIIANGITA
HHCCCCCEEECCCCCCCCCCHHHHCCCCCEECCCCCEEEECCCCHHHHHHHHHHHCCHHH
SMIFSGMQNFANKVAKLTGTSSYSQMQEAINYGQSLLSNTVAYGNFITNWVAPYLDLNNK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLNFLPSYGGKANTNNVTPNLTPQQAQQEQKVIMNQLEQATNAPTPAQIDKILANPYSPT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH
AKTLMAYGLYRSTKVIGGVIDEMQTKVNQVYQMGFARNFLEHNSNSNNMNGFGVKMGYKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHH
FFGKKRMFGLRYYGFYDFGYAQFGAGSSLVKATLSSYGAGTDFLYNVFTRKRGTEAIDIG
HHCCHHHCEEEEEEEEECCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEH
FFAGIQLAGQTWKTNFLDQVDGNHLKPKDTSFQFLFDLGIRTNFSKIAKQRRSRFSQGIE
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
FGVKIPVLYHTYYQSEGVTAKYRRAFSFYVGYSIGF
CCEEEEEEEEEEECCCCCCHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MQDFIFNKKWLIYSSLLPLFFLNPLAAEDDGFFMGVSYQTSLAIQRVDNSGLNASQDAST
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHEEECCCCCCCCCHHHHH
YIRQNAIALESAAVPLAYYLEAMGQQTRVLMQMLCPDPSKRCLLYAGGYPKESNGGTGNN
HHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC
PPRGNVNATFDMQSLVSNLDKLTQLIGETLIRNPENLSNAKLVEVKFGNQSTVIALPSGL
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCHHH
ASVMNALNDDITNALTTLWYNQTLTNKSFSTPDGSPVSFSPKVLQHLLQDGLATASSNQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
ICSTQNQCTATNEANSIAQNAQNIFQALMQAGILGGLANEKQFGFTYNKAPNGSNSQQGY
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHH
QSFSGPGYYTKNGNTNGTQAPLKELPAGATVGSGNGQYTYHPSSAVYYLADSIIANGITA
HHCCCCCEEECCCCCCCCCCHHHHCCCCCEECCCCCEEEECCCCHHHHHHHHHHHCCHHH
SMIFSGMQNFANKVAKLTGTSSYSQMQEAINYGQSLLSNTVAYGNFITNWVAPYLDLNNK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLNFLPSYGGKANTNNVTPNLTPQQAQQEQKVIMNQLEQATNAPTPAQIDKILANPYSPT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH
AKTLMAYGLYRSTKVIGGVIDEMQTKVNQVYQMGFARNFLEHNSNSNNMNGFGVKMGYKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHH
FFGKKRMFGLRYYGFYDFGYAQFGAGSSLVKATLSSYGAGTDFLYNVFTRKRGTEAIDIG
HHCCHHHCEEEEEEEEECCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEH
FFAGIQLAGQTWKTNFLDQVDGNHLKPKDTSFQFLFDLGIRTNFSKIAKQRRSRFSQGIE
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
FGVKIPVLYHTYYQSEGVTAKYRRAFSFYVGYSIGF
CCEEEEEEEEEEECCCCCCHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA