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The map label for this gene is fliW1 [H]

Identifier: 188527938

GI number: 188527938

Start: 1169829

End: 1170236

Strand: Direct

Name: fliW1 [H]

Synonym: HPSH_05955

Alternate gene names: 188527938

Gene position: 1169829-1170236 (Clockwise)

Preceding gene: 188527930

Following gene: 188527939

Centisome position: 72.73

GC content: 37.01

Gene sequence:

>408_bases
GTGAATTACTTTTTAAAAGCCCCTATTTTAGGATTTGAGCATATCCATGAAGTGCGTTTGGAAAAAATTGATTCCTTATT
CAGCCGATTAATTGGCCAAACCAATTCCCCCATGGCGTTGGATATGGTCTTAGTGAATCCTTATTGTTTGAGGGAATACA
GCTTTGTGATACCCAAATACATAGAATTACTGCTAGAATTAGATTCTCATTCCAAAGTTGAGGTGTATTGCGTGGTCGTG
TTGCAAAAAAATTTAGAAGATTCTATGGTTAATTTCTTAGCCCCTTTGGTGTTTAATTCCAAAAATGGCTTTGGCGCTCA
AGTCGCGCTTTCTATGATGGATTATCCGGATTTTGGCTTTAGAGATCCTTTAAAAAGCTTTGTGATTCAAGAAAGAGAAC
GAGCTTAA

Upstream 100 bases:

>100_bases
ATGGTTGGATTTTGGAACGCCTTTTGCTTTTACGCTTTTAATTGTTGCGTATTTTCTTAAAATTATACAACAAAGCATTT
AAATTAAAAAGGATAGTCTA

Downstream 100 bases:

>100_bases
GGGTTTTTAACATGAAATTCGCTCTCACAGGGGGAGGCACAGGCGGGCATCTCTCTATCGCTAAAGCCTTAGCCATAGAA
TTAGAAAAGCAAGGCATAGA

Product: flagellar assembly protein FliW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNYFLKAPILGFEHIHEVRLEKIDSLFSRLIGQTNSPMALDMVLVNPYCLREYSFVIPKYIELLLELDSHSKVEVYCVVV
LQKNLEDSMVNFLAPLVFNSKNGFGAQVALSMMDYPDFGFRDPLKSFVIQERERA

Sequences:

>Translated_135_residues
MNYFLKAPILGFEHIHEVRLEKIDSLFSRLIGQTNSPMALDMVLVNPYCLREYSFVIPKYIELLLELDSHSKVEVYCVVV
LQKNLEDSMVNFLAPLVFNSKNGFGAQVALSMMDYPDFGFRDPLKSFVIQERERA
>Mature_135_residues
MNYFLKAPILGFEHIHEVRLEKIDSLFSRLIGQTNSPMALDMVLVNPYCLREYSFVIPKYIELLLELDSHSKVEVYCVVV
LQKNLEDSMVNFLAPLVFNSKNGFGAQVALSMMDYPDFGFRDPLKSFVIQERERA

Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum [H]

COG id: COG1699

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003775 [H]

Pfam domain/function: PF02623 FliW [H]

EC number: NA

Molecular weight: Translated: 15597; Mature: 15597

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYFLKAPILGFEHIHEVRLEKIDSLFSRLIGQTNSPMALDMVLVNPYCLREYSFVIPKY
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHH
IELLLELDSHSKVEVYCVVVLQKNLEDSMVNFLAPLVFNSKNGFGAQVALSMMDYPDFGF
HHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
RDPLKSFVIQERERA
CCHHHHHHHHHHCCC
>Mature Secondary Structure
MNYFLKAPILGFEHIHEVRLEKIDSLFSRLIGQTNSPMALDMVLVNPYCLREYSFVIPKY
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHH
IELLLELDSHSKVEVYCVVVLQKNLEDSMVNFLAPLVFNSKNGFGAQVALSMMDYPDFGF
HHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
RDPLKSFVIQERERA
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA