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The map label for this gene is atpD [H]

Identifier: 188527915

GI number: 188527915

Start: 1146641

End: 1148050

Strand: Reverse

Name: atpD [H]

Synonym: HPSH_05830

Alternate gene names: 188527915

Gene position: 1148050-1146641 (Counterclockwise)

Preceding gene: 188527916

Following gene: 188527914

Centisome position: 71.37

GC content: 44.75

Gene sequence:

>1410_bases
ATGAAAGCGATGGAAGGTAAAATCATTCAGGTTTTAGGCCCGGTGGTAGATGTGGAGTTTGAGTCCTATCTACCGGCGAT
TTTTGAAGCGTTAGACATTAATTTTGAAATCAATGGCACTCAAAAATCTTTAGTTTTAGAGGTGGCAGCCCATTTGGGCG
CTAATCGGGTGCGAGCGATTGCTATGGATATGACAGAAGGCTTAGTGCGTAACCAAGCCGTCAAAGCTCGTGGTAAAATG
ATTGAAGTGCCTGTGGGCGAAGAAGTGTTAGGGCGCATTTTTAATGTTGTGGGCGAAAGTATTGACAATTTAGAGCCTCT
TAAGCCGTCCTTAACCTGGCCCATTCACAGAAAAGCCCCTAGTTTTGAGCAGCAAAGCACTAAAACAGAAATGTTTGAAA
CCGGTATCAAAGTCATTGACTTACTAGCCCCTTATTCTAAGGGCGGTAAAGTAGGCTTGTTTGGTGGGGCTGGCGTAGGG
AAAACGGTGATCATTATGGAGCTTATCCATAATGTGGCTTATAAGCATAACGGGTATTCGGTGTTTGCAGGTGTGGGGGA
ACGCACCAGAGAGGGGAATGATCTGTATTTTGAGATGAAAGAAGGGGGCGTTTTAGACAAAGTTGCACTGTGCTATGGGC
AAATGAATGAGCCGCCAGGCGCGAGAAACCGCATCGCATTCACCGGCTTGACGATGGCGGAGTATTTTCGTGATGAAAAG
GGCTTAGATGTGTTGATGTTTATTGACAATATCTTTAGATACGCTCAAAGCGGTTCGGAAATGAGTGCGCTATTAGGCCG
TATCCCTTCAGCCGTGGGGTATCAGCCCACGCTAGCTGGGGAAATGGGGAAACTTCAAGAGCGTATCGCTTCCACTAAAA
ATGGCTCTATCACTTCGGTTCAAGCGGTGTATGTGCCAGCAGATGACTTGACTGACCCAGCCCCTGCTTCGGTGTTTGCG
CATTTGGATGCGACTACGGTGTTGAACAGAAAGATCGCTGAAAAAGGGATTTATCCGGCGGTGGATCCTTTGGATTCCAC
TTCAAGGATTTTAAGCCCTCAAATGATCGGCGAGAAGCATTATGAAATCGCTACCGGTATCCAGCAGGTTTTGCAAAAAT
ACAAGGATTTGCAAGATATTATTGCGATTTTGGGCTTAGACGAATTGAGCGAAGAGGATAAAAAGATTGTTGAGAGAGCC
AGAAAAATTGAGAAGTTTTTATCCCAGCCGTTTTTTGTGGCTGAAGTGTTTACAGGAAGTCCCGGTAAATATGTAACCCT
TCAAGAGACTTTAGAAGGTTTTGGAGGGATTTTAGAGGGTAAATACGATCACATTCCTGAAAACGCGTTTTACATGGTGG
GCAGCATTCAAGAGGTTTTAGAAAAAGCTAAAAACATGAAAAATTCCTAA

Upstream 100 bases:

>100_bases
ATTTCTTATAATAAAGCCAGACAAGAGGCGATTACGACCGAGCTAGTAGAAATCAATGCAGGCGTAGAAGCCCTAAAATA
AAAATTACATTTAAGGAGCG

Downstream 100 bases:

>100_bases
GGGTTTTGCCATGGCTTTGTTGAAAATTAGTGTGGTAGTTCCTGAGGGGGAAGTTTATACAGGAGAGGTTAAAAGCGTTG
TGTTGCCAGGAGTTGAAGGG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEINGTQKSLVLEVAAHLGANRVRAIAMDMTEGLVRNQAVKARGKM
IEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVG
KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK
GLDVLMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSVQAVYVPADDLTDPAPASVFA
HLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKIVERA
RKIEKFLSQPFFVAEVFTGSPGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS

Sequences:

>Translated_469_residues
MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEINGTQKSLVLEVAAHLGANRVRAIAMDMTEGLVRNQAVKARGKM
IEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVG
KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK
GLDVLMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSVQAVYVPADDLTDPAPASVFA
HLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKIVERA
RKIEKFLSQPFFVAEVFTGSPGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS
>Mature_469_residues
MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEINGTQKSLVLEVAAHLGANRVRAIAMDMTEGLVRNQAVKARGKM
IEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVG
KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK
GLDVLMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSVQAVYVPADDLTDPAPASVFA
HLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKIVERA
RKIEKFLSQPFFVAEVFTGSPGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=470, Percent_Identity=67.4468085106383, Blast_Score=643, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=319, Percent_Identity=29.153605015674, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI19913428, Length=436, Percent_Identity=25.4587155963303, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI19913426, Length=434, Percent_Identity=25.3456221198157, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI50345984, Length=347, Percent_Identity=25.6484149855908, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4757810, Length=347, Percent_Identity=25.6484149855908, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI1790170, Length=462, Percent_Identity=66.4502164502164, Blast_Score=625, Evalue=1e-180,
Organism=Escherichia coli, GI1788251, Length=337, Percent_Identity=29.673590504451, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI1790172, Length=388, Percent_Identity=24.7422680412371, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25144756, Length=467, Percent_Identity=66.3811563169165, Blast_Score=631, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=319, Percent_Identity=30.4075235109718, Blast_Score=141, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17570191, Length=422, Percent_Identity=24.8815165876777, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17510931, Length=348, Percent_Identity=26.7241379310345, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71988063, Length=351, Percent_Identity=24.7863247863248, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=351, Percent_Identity=24.7863247863248, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71988074, Length=329, Percent_Identity=23.7082066869301, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322581, Length=463, Percent_Identity=68.0345572354212, Blast_Score=635, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=421, Percent_Identity=26.603325415677, Blast_Score=123, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6319370, Length=350, Percent_Identity=25.4285714285714, Blast_Score=106, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6320016, Length=260, Percent_Identity=25.7692307692308, Blast_Score=86, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24638766, Length=467, Percent_Identity=68.5224839400428, Blast_Score=645, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=474, Percent_Identity=63.5021097046413, Blast_Score=593, Evalue=1e-170,
Organism=Drosophila melanogaster, GI24583992, Length=319, Percent_Identity=28.8401253918495, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI20129479, Length=335, Percent_Identity=28.3582089552239, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24583988, Length=319, Percent_Identity=28.5266457680251, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24583986, Length=319, Percent_Identity=28.5266457680251, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24583984, Length=319, Percent_Identity=28.5266457680251, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281361666, Length=419, Percent_Identity=25.0596658711217, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24646341, Length=419, Percent_Identity=25.0596658711217, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI17136796, Length=419, Percent_Identity=25.0596658711217, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24658560, Length=428, Percent_Identity=23.3644859813084, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24638768, Length=95, Percent_Identity=55.7894736842105, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 51509; Mature: 51509

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEINGTQKSLVLEVAAHLGANRVRAI
CCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCHHHHHH
AMDMTEGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAP
HHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
VFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK
EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHCCCC
GLDVLMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSV
CCEEHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
QAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKH
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHCCHH
YEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKIVERARKIEKFLSQPFFVAEVFTGS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
PGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS
CCCEEEHHHHHHHHCCCCCCCHHCCCCCCEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEINGTQKSLVLEVAAHLGANRVRAI
CCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCHHHHHH
AMDMTEGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAP
HHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
VFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK
EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHCCCC
GLDVLMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSV
CCEEHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
QAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKH
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHCCHH
YEIATGIQQVLQKYKDLQDIIAILGLDELSEEDKKIVERARKIEKFLSQPFFVAEVFTGS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
PGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS
CCCEEEHHHHHHHHCCCCCCCHHCCCCCCEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA