| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527905
Identifier: 188527905
GI number: 188527905
Start: 1140483
End: 1140686
Strand: Reverse
Name: 188527905
Synonym: HPSH_05780
Alternate gene names: NA
Gene position: 1140686-1140483 (Counterclockwise)
Preceding gene: 188527906
Following gene: 188527903
Centisome position: 70.91
GC content: 39.71
Gene sequence:
>204_bases ATGATCAATGCCATTTCTTCTCTTGCTCCGGTGCAATCTTTGGGGAATTATAAGCGTGTGGAAAAGAATGAAAAAGTTGA AAATAGCGAGGCCGCTCTTGATAGGGTAGCTGAAATCAAGCAAGCTATTGAAAATAACCAGTATAAAATCAACTTGCATG AGACTTCTCACAAAATGGCACAGGATTTATTGGGGATAGGCTAG
Upstream 100 bases:
>100_bases TAAGGAATTGCAAAAACAGATTTCAAAAATCCATTAACTTTTTTTCTTTTTTGCCGATACTTGCTGTAATGAAATGAATA TCAAATTAAAGGATTTTACA
Downstream 100 bases:
>100_bases GGGGTTTAAGGGCTTCATTTCTAGGGGGTTTTATTCTTGCTGTCGTTTTGTTTTTCATTAAATTTTAGTTTCTTTATGTT TTGAGTTTTTTGCTCTCTTA
Product: flgM protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MINAISSLAPVQSLGNYKRVEKNEKVENSEAALDRVAEIKQAIENNQYKINLHETSHKMAQDLLGIG
Sequences:
>Translated_67_residues MINAISSLAPVQSLGNYKRVEKNEKVENSEAALDRVAEIKQAIENNQYKINLHETSHKMAQDLLGIG >Mature_67_residues MINAISSLAPVQSLGNYKRVEKNEKVENSEAALDRVAEIKQAIENNQYKINLHETSHKMAQDLLGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7465; Mature: 7465
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAISSLAPVQSLGNYKRVEKNEKVENSEAALDRVAEIKQAIENNQYKINLHETSHKMA CCCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH QDLLGIG HHHHCCC >Mature Secondary Structure MINAISSLAPVQSLGNYKRVEKNEKVENSEAALDRVAEIKQAIENNQYKINLHETSHKMA CCCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH QDLLGIG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA