| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is zwf [H]
Identifier: 188527880
GI number: 188527880
Start: 1115304
End: 1116581
Strand: Direct
Name: zwf [H]
Synonym: HPSH_05655
Alternate gene names: 188527880
Gene position: 1115304-1116581 (Clockwise)
Preceding gene: 188527876
Following gene: 188527881
Centisome position: 69.34
GC content: 37.48
Gene sequence:
>1278_bases ATGTTAGATTTTGATTTGGTTCTTTTTGGCGCGACTGGGGATTTAGCCATGCGAAAGCTCTTTGTTTCGCTCTATGAAAT TTATACCCATTATGGTTTTAAAAAAGATTCTAAGATTATCGCATCTGGGCGTAAGGAGCTATCCAATGAAGAATTTTTAG CGCTCCTTTGCGAAAAGACGCAACTGCATTCAAGAGAAAAGGGTGAGGAATTTTTAGCCCATATCAGTTATTTTTGCGTT CGTTTGGATAACCCTAAAGACTTTGAAGGATTGAGTAAAATCGCTACAAAAAATAAACCCTTGATTTTCTACTTTTCTAT CTCCCCTAGTTTTTTTGCAACGACCGCTCAACATCTCGCCAAAAACGCGCTCAATCACGCCAATGCGCGCTTGATTTTAG AAAAGCCTTTAGGGCATGATTTAAAGACTTGTAAGGAGATTTTCCAAAGCATTAGCGCTTTTTTTAAAGAAGAACAGATC TTTAGAATCGATCATTATTTAGGGAAAAAGGGCGTTCAAAATATCCTTGAATTGCGCTTAAATAACCCTATCTTAAACAT TTTATGGGATCAAATCAGTGCGGTTGAAATCTGCGTGTATGAGACTTTAGGGGTGGAAGAAAGAGGCGAATTTTACGATA AAATCGGGGCTTTAAGGGATATGGTTCAAAACCATCTCTTGCAAGTTTTATCCCTTATCGCTACAGATTTACCCAACGAT TTAAAGGATTTGAGGAAAGAAAAAATCAAAGTTTTAAAAACCTTACAACCCCCTAAAGACTTTAAAAAACAAGTGATCCG TGCCCAATATCAAGGCTATAGAGATGAAAATAAGGTCCATAAAGAGAGCCAGACAGAAACTTTTATCGCTATTAAAGCCT TTTTGGATACACCTAAATTTAAAGGCGTGCCTTTCTACCTTAAACACGCTAAAAAAATGCCCCACAACCAAGCGAGCGTG AAAATCCATTTTAATGCAATCAATACGCTAGAATTTTTCCTCTCTCAAGATAAAATCACCCTCACCCTACAAGATCATCA AAACCCCCTTATTTTAGAAACCCATCACAAACAAGAATTTTTGCAGCCCTACGCTAAATTGCTCTATGATGCGATACAAA ATAACCACAACAATTTCGCCCACCAGTTGGAATTGGAAGCGTCATGGGTTTTTATTGACACGCTCATAGAAGGTTTTATG AATAACGCCACGCCCTTATATTCCTATGAAAGCCACAATCTAAACGAATCCGAATTTTTAAAACCACTCTATCAATGA
Upstream 100 bases:
>100_bases TTTTCTTTGATTTGTTCTAAAGAATGCTTAGGCATGAACACCCCTTTAATTAAGATTTAATATATAATAATAACTCAAAA ACACTCTAAAAGGGTTATTG
Downstream 100 bases:
>100_bases AAGGGATTTCATGGGTTATCAATTGTTTGAATTTGAAAATTTAGAAAATTGCCACAAGGCTTTAACAGAGCGTTTTAAAG AATTTTTTAACGCCACCTTA
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLALLCEKTQLHSREKGEEFLAHISYFCV RLDNPKDFEGLSKIATKNKPLIFYFSISPSFFATTAQHLAKNALNHANARLILEKPLGHDLKTCKEIFQSISAFFKEEQI FRIDHYLGKKGVQNILELRLNNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVHKESQTETFIAIKAFLDTPKFKGVPFYLKHAKKMPHNQASV KIHFNAINTLEFFLSQDKITLTLQDHQNPLILETHHKQEFLQPYAKLLYDAIQNNHNNFAHQLELEASWVFIDTLIEGFM NNATPLYSYESHNLNESEFLKPLYQ
Sequences:
>Translated_425_residues MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLALLCEKTQLHSREKGEEFLAHISYFCV RLDNPKDFEGLSKIATKNKPLIFYFSISPSFFATTAQHLAKNALNHANARLILEKPLGHDLKTCKEIFQSISAFFKEEQI FRIDHYLGKKGVQNILELRLNNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVHKESQTETFIAIKAFLDTPKFKGVPFYLKHAKKMPHNQASV KIHFNAINTLEFFLSQDKITLTLQDHQNPLILETHHKQEFLQPYAKLLYDAIQNNHNNFAHQLELEASWVFIDTLIEGFM NNATPLYSYESHNLNESEFLKPLYQ >Mature_425_residues MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLALLCEKTQLHSREKGEEFLAHISYFCV RLDNPKDFEGLSKIATKNKPLIFYFSISPSFFATTAQHLAKNALNHANARLILEKPLGHDLKTCKEIFQSISAFFKEEQI FRIDHYLGKKGVQNILELRLNNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVHKESQTETFIAIKAFLDTPKFKGVPFYLKHAKKMPHNQASV KIHFNAINTLEFFLSQDKITLTLQDHQNPLILETHHKQEFLQPYAKLLYDAIQNNHNNFAHQLELEASWVFIDTLIEGFM NNATPLYSYESHNLNESEFLKPLYQ
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=470, Percent_Identity=27.0212765957447, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI109389365, Length=470, Percent_Identity=27.0212765957447, Blast_Score=181, Evalue=8e-46, Organism=Homo sapiens, GI52145310, Length=353, Percent_Identity=30.028328611898, Blast_Score=157, Evalue=1e-38, Organism=Escherichia coli, GI1788158, Length=456, Percent_Identity=34.2105263157895, Blast_Score=251, Evalue=7e-68, Organism=Caenorhabditis elegans, GI17538218, Length=445, Percent_Identity=28.7640449438202, Blast_Score=196, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6324088, Length=461, Percent_Identity=30.8026030368764, Blast_Score=203, Evalue=4e-53, Organism=Drosophila melanogaster, GI24643350, Length=465, Percent_Identity=29.0322580645161, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24643352, Length=465, Percent_Identity=29.0322580645161, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI221513548, Length=361, Percent_Identity=26.3157894736842, Blast_Score=135, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 49375; Mature: 49375
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLALLCEKT CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH QLHSREKGEEFLAHISYFCVRLDNPKDFEGLSKIATKNKPLIFYFSISPSFFATTAQHLA HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH KNALNHANARLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDHYLGKKGVQNILELRL HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC NNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVHKESQTETFIAIKAFLDTPKF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC KGVPFYLKHAKKMPHNQASVKIHFNAINTLEFFLSQDKITLTLQDHQNPLILETHHKQEF CCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCEEEEEECCCCCEEEECCHHHHH LQPYAKLLYDAIQNNHNNFAHQLELEASWVFIDTLIEGFMNNATPLYSYESHNLNESEFL HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHH KPLYQ HHHCC >Mature Secondary Structure MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLALLCEKT CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH QLHSREKGEEFLAHISYFCVRLDNPKDFEGLSKIATKNKPLIFYFSISPSFFATTAQHLA HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH KNALNHANARLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDHYLGKKGVQNILELRL HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC NNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVHKESQTETFIAIKAFLDTPKF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC KGVPFYLKHAKKMPHNQASVKIHFNAINTLEFFLSQDKITLTLQDHQNPLILETHHKQEF CCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCEEEEEECCCCCEEEECCHHHHH LQPYAKLLYDAIQNNHNNFAHQLELEASWVFIDTLIEGFMNNATPLYSYESHNLNESEFL HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHH KPLYQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]