Click here to switch to the map view.

The map label for this gene is 188527856

Identifier: 188527856

GI number: 188527856

Start: 1088529

End: 1089890

Strand: Reverse

Name: 188527856

Synonym: HPSH_05520

Alternate gene names: NA

Gene position: 1089890-1088529 (Counterclockwise)

Preceding gene: 188527857

Following gene: 188527852

Centisome position: 67.76

GC content: 37.37

Gene sequence:

>1362_bases
ATGTTCCAACCCCTATTAGATGCTTATACAGACAGCACCCATTTAGATGAAACAACCCATAAGCCCCCAATTAATATAGC
CCTAGCCAATTGGTGGCCTTTAAAGAATAGCGAAAAAAAAGGATTCAGAGATTTCATTTTGCATGTCATCCTAAAACAAC
GCTATAAAATCATTCTACACAGCAACCCTAACGAACCCTCAGATCTAGTCTTTGGCAATCCTTTGGAACAGGCTAGAAAG
ATCTTATCCTATCAAAACACCAAAAGAGTGTTTTACACCGGCGAGAATGAAGCGCCTAATTTCAACCTCTTTGATTACGC
CATAGGCTTTGATGAATTGAATTTCAACGATCGTTATTTGAGAATGCCTTTGTATTACGCTTCTTTGCATTATAAAGCCG
AGATTGTTAATGACACCACTTCACCCTATAAACTCAAAGCGGACAGCCTTTATACTTTAAAAAAACCCTCCCATGAATTT
AAAGAAAACCACCCACATTTATGCGCGCTAATCAATAATGAGATCGATCCTTTGAAAAGAGGGTTTGCCAGTTTTGTAGC
GAGCAACGCTAACGCTCCTGTTAGGAACGCTTTCTATGAGGCTTTAAATTCTATTTGGCCAGTGGCTGGGGGAGGAAGCG
TGAAAAACACTCTGGGCTATAATGTCAAAAATAAAAACGAATTTTTAAGCCAATACAAATTCAACCTCTGTTTTGAAAAC
TCACAAGGCTATGGCTATGTAACCGAAAAAATCCTTGATGCGTATTTTAGCCATACTATCCCTATTTATTGGGGGAGTCC
CAGCGTGGCGAAAGATTTTAACCCTAAAAGTTTTGTGAATGTCCATGATTTCAACAACTTTGATGAAGCGATAGATTATA
TCAGGTATTTACACACGCACCAAAACGCTTATTTAGACATGCTCTATGAAAACCCTTTAAACACCATTGATGGGAAAGCT
GGTTTTTACCAAAATTTGAGTTTTGAAAAGATCTTAGATTTTTTTAAAACGATTTTAGAGAACGATACGATTTATCATAA
CCCTTCCGCTCTTTGTCGTGATTTGAATGAGCCGTTAGTTTCCATTGATGATTTGAGAAGAGATCATGATGATTTGAGGG
TTAATTATGATGATTTGAGGGTTAATTATGATGATTTGAGGGTTAATTATGATGATTTGAGGGTTAATTATGATGATTTG
AGGGTTAATTATGATGATTTGAGAAGAGATTACGAACGCCTCTTATCAAAGGCTACCCCTCTTTTGGAGCTATCCCAGAA
CACCTCTTTTAAAATCTATCGCAAAGCTTATCAAAAATCCTTACCCTTGCTATGCACCATAAGGAGGTGGGTTAAAAAAT
AG

Upstream 100 bases:

>100_bases
CACTTTCTTATACTTTTTGGTAGCGATACCTTTTGCTCTTGTGATCTTGGCGTCTTTCAAACGCCATTTGAGTTTGCCTA
AATTAGTTTAAAGGATAAGA

Downstream 100 bases:

>100_bases
GTTTGTAAAACCAATCAAACCCCTTGCGCTATCATCGCCGACGCTACTTTTCTAAAACCAGCGATATTGGCCCCTAAAAC
AAAATTAGTAGGGTCTTTAA

Product: alpha-(1,3)-fucosyltransferase

Products: NA

Alternate protein names: Alpha-1 3-Fucosyltransferase; Alpha1 3-Fucosyltransferase; Fucosyltransferase; LPS Biosynthesis Related Glycosyltransferase; Alpha1 3-Fucosyl Transferase; Alpha 1 3-Fucosyltransferase; Alpha-1 3/4-Fucosyltransferase N-Terminal Fragment; Glycosyl Transferase

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MFQPLLDAYTDSTHLDETTHKPPINIALANWWPLKNSEKKGFRDFILHVILKQRYKIILHSNPNEPSDLVFGNPLEQARK
ILSYQNTKRVFYTGENEAPNFNLFDYAIGFDELNFNDRYLRMPLYYASLHYKAEIVNDTTSPYKLKADSLYTLKKPSHEF
KENHPHLCALINNEIDPLKRGFASFVASNANAPVRNAFYEALNSIWPVAGGGSVKNTLGYNVKNKNEFLSQYKFNLCFEN
SQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFNNFDEAIDYIRYLHTHQNAYLDMLYENPLNTIDGKA
GFYQNLSFEKILDFFKTILENDTIYHNPSALCRDLNEPLVSIDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDL
RVNYDDLRRDYERLLSKATPLLELSQNTSFKIYRKAYQKSLPLLCTIRRWVKK

Sequences:

>Translated_453_residues
MFQPLLDAYTDSTHLDETTHKPPINIALANWWPLKNSEKKGFRDFILHVILKQRYKIILHSNPNEPSDLVFGNPLEQARK
ILSYQNTKRVFYTGENEAPNFNLFDYAIGFDELNFNDRYLRMPLYYASLHYKAEIVNDTTSPYKLKADSLYTLKKPSHEF
KENHPHLCALINNEIDPLKRGFASFVASNANAPVRNAFYEALNSIWPVAGGGSVKNTLGYNVKNKNEFLSQYKFNLCFEN
SQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFNNFDEAIDYIRYLHTHQNAYLDMLYENPLNTIDGKA
GFYQNLSFEKILDFFKTILENDTIYHNPSALCRDLNEPLVSIDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDL
RVNYDDLRRDYERLLSKATPLLELSQNTSFKIYRKAYQKSLPLLCTIRRWVKK
>Mature_453_residues
MFQPLLDAYTDSTHLDETTHKPPINIALANWWPLKNSEKKGFRDFILHVILKQRYKIILHSNPNEPSDLVFGNPLEQARK
ILSYQNTKRVFYTGENEAPNFNLFDYAIGFDELNFNDRYLRMPLYYASLHYKAEIVNDTTSPYKLKADSLYTLKKPSHEF
KENHPHLCALINNEIDPLKRGFASFVASNANAPVRNAFYEALNSIWPVAGGGSVKNTLGYNVKNKNEFLSQYKFNLCFEN
SQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFNNFDEAIDYIRYLHTHQNAYLDMLYENPLNTIDGKA
GFYQNLSFEKILDFFKTILENDTIYHNPSALCRDLNEPLVSIDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDL
RVNYDDLRRDYERLLSKATPLLELSQNTSFKIYRKAYQKSLPLLCTIRRWVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53153; Mature: 53153

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQPLLDAYTDSTHLDETTHKPPINIALANWWPLKNSEKKGFRDFILHVILKQRYKIILH
CCCCHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCCCHHHHHHHHHHHHHCEEEEEE
SNPNEPSDLVFGNPLEQARKILSYQNTKRVFYTGENEAPNFNLFDYAIGFDELNFNDRYL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEE
RMPLYYASLHYKAEIVNDTTSPYKLKADSLYTLKKPSHEFKENHPHLCALINNEIDPLKR
EEEEEEEEEEEEEEEECCCCCCEEEECCCEEEECCCCHHHHHCCCCEEEEECCCCCHHHH
GFASFVASNANAPVRNAFYEALNSIWPVAGGGSVKNTLGYNVKNKNEFLSQYKFNLCFEN
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHEEEEEEEC
SQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFNNFDEAIDYIRYLHTH
CCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHC
QNAYLDMLYENPLNTIDGKAGFYQNLSFEKILDFFKTILENDTIYHNPSALCRDLNEPLV
CCHHEEHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCE
SIDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRRDYERLLSKATP
EHHHHHCCCCCCEEEHHHEEEEHHHEEEEHHHEEEEHHHHCCCHHHHHHHHHHHHHHCCC
LLELSQNTSFKIYRKAYQKSLPLLCTIRRWVKK
CEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MFQPLLDAYTDSTHLDETTHKPPINIALANWWPLKNSEKKGFRDFILHVILKQRYKIILH
CCCCHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCCCHHHHHHHHHHHHHCEEEEEE
SNPNEPSDLVFGNPLEQARKILSYQNTKRVFYTGENEAPNFNLFDYAIGFDELNFNDRYL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEE
RMPLYYASLHYKAEIVNDTTSPYKLKADSLYTLKKPSHEFKENHPHLCALINNEIDPLKR
EEEEEEEEEEEEEEEECCCCCCEEEECCCEEEECCCCHHHHHCCCCEEEEECCCCCHHHH
GFASFVASNANAPVRNAFYEALNSIWPVAGGGSVKNTLGYNVKNKNEFLSQYKFNLCFEN
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHEEEEEEEC
SQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFNNFDEAIDYIRYLHTH
CCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHC
QNAYLDMLYENPLNTIDGKAGFYQNLSFEKILDFFKTILENDTIYHNPSALCRDLNEPLV
CCHHEEHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCE
SIDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRRDYERLLSKATP
EHHHHHCCCCCCEEEHHHEEEEHHHEEEEHHHEEEEHHHHCCCHHHHHHHHHHHHHHCCC
LLELSQNTSFKIYRKAYQKSLPLLCTIRRWVKK
CEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA