Click here to switch to the map view.

The map label for this gene is 188527823

Identifier: 188527823

GI number: 188527823

Start: 1054042

End: 1054143

Strand: Reverse

Name: 188527823

Synonym: HPSH_05345

Alternate gene names: NA

Gene position: 1054143-1054042 (Counterclockwise)

Preceding gene: 188527824

Following gene: 188527822

Centisome position: 65.53

GC content: 35.29

Gene sequence:

>102_bases
TTGAGTGCCGCTTTTGATTTTAGCGGCATTTTTGAAAAATTACGCTCAAAAATCAAAAAATTCAGCTATAATAACGCTTC
ATGTGAAAATTTCGGGGCGTAG

Upstream 100 bases:

>100_bases
GAAAGTAGTTTTTAAGAAACGAAAAGCTTAAAAATCCTTTAGAGCTGTTTTTAAAAAAATAGCTTTTTAAAAGGGTGGGG
GAGTTGGATTAATATCATTT

Downstream 100 bases:

>100_bases
CGCAGTCTGGTTAGCGCACTTGGTTTGGGACCAAGGGGTCGAAGGTTCGAATCCTTTCGCCCCGACCACTTTTTTGCATA
ATTTGTTGTTCTGTTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 33; Mature: 32

Protein sequence:

>33_residues
MSAAFDFSGIFEKLRSKIKKFSYNNASCENFGA

Sequences:

>Translated_33_residues
MSAAFDFSGIFEKLRSKIKKFSYNNASCENFGA
>Mature_32_residues
SAAFDFSGIFEKLRSKIKKFSYNNASCENFGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3709; Mature: 3578

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAFDFSGIFEKLRSKIKKFSYNNASCENFGA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SAAFDFSGIFEKLRSKIKKFSYNNASCENFGA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA