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The map label for this gene is 188527779

Identifier: 188527779

GI number: 188527779

Start: 998988

End: 999752

Strand: Reverse

Name: 188527779

Synonym: HPSH_05050

Alternate gene names: NA

Gene position: 999752-998988 (Counterclockwise)

Preceding gene: 188527780

Following gene: 188527778

Centisome position: 62.15

GC content: 36.86

Gene sequence:

>765_bases
ATGAACACCCACCTCAAACAATTGATTGAAATTTCGCATTTGGATAAAGAAATTGACTCCTTAGAGCCATTGATCAGAGA
AAAACGCAAAGACTTGGATAAAGCCTTGAATGATAAAGAAGCTAAAAATAAAGCGATTTTGAATTTAGAAGAGGAAAAAT
TAGCCCTAAAATTACAGGTTTCTAAAAACGAGCAAGCCTTACAAGACGCAAACGCTAAAATCGCCAGCATCCAAAAGAAA
ATGAGCGAGATCAAATCCGAAAGGGAATTGCGCTCTTTAAACATTGAAGAAGATATTGCTAAAGAGCGATCCAACCAGAC
CAACAGAGAAATTGAAAACCTGCAAAATGAAATCAAGCACAAAAGCGAAAAACAAGAGGATTTGAAAAAAGAAATGCTAG
AGCTTGAAAAATTAGCGTTGGAATTGGAAAGTTTAGTGGAAAGCGAAGTCAAAAACATCAAAGAAACCCAACAAATCATC
TTTAAAAAGAAAGAAGATCTCGTAGAAAAAACCGAGCCTAAAATCTATAGCTTTTATGAAAGGATTAGAAGATGGGCGAA
AAACACGAGCATTGTAACGATCAAAAAACAGGCTTGTGGGGGTTGTTTTATTAGATTGAACGATAAGATTTATACTGAAG
TGCTAACGAGTGGGGATATGATCACTTGCCCGTATTGCGGGCGTATTTTATACGCTGAGGGCGCGTATGAAAACAGCGCT
CAACTTCCAAAAGAAAGCCAAGAAGAAAGCCAAGAATTAGTTTGA

Upstream 100 bases:

>100_bases
GGGTTTTGCACTGATTGTGGCTGAAATTTTGCATTCTTTCAATTATTTGGTTACAATAGAGAATTTTAAAAACCCCTTGC
AAATCATTTAAAGGAAAGCG

Downstream 100 bases:

>100_bases
TTGTTTAAGTTTTTCTACCTTTTATTTTTAACTTTGGGGCATCTTCTTGGTGCGCCTTTCATCTTTTTTTGGAGTTTTAA
AGAAAAATACCGCCATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQALQDANAKIASIQKK
MSEIKSERELRSLNIEEDIAKERSNQTNREIENLQNEIKHKSEKQEDLKKEMLELEKLALELESLVESEVKNIKETQQII
FKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA
QLPKESQEESQELV

Sequences:

>Translated_254_residues
MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQALQDANAKIASIQKK
MSEIKSERELRSLNIEEDIAKERSNQTNREIENLQNEIKHKSEKQEDLKKEMLELEKLALELESLVESEVKNIKETQQII
FKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA
QLPKESQEESQELV
>Mature_254_residues
MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQALQDANAKIASIQKK
MSEIKSERELRSLNIEEDIAKERSNQTNREIENLQNEIKHKSEKQEDLKKEMLELEKLALELESLVESEVKNIKETQQII
FKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA
QLPKESQEESQELV

Specific function: Unknown

COG id: COG1579

COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29565; Mature: 29565

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHCCCHHHHEEEEEEE
SKNEQALQDANAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQTNREIENLQNEIKH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH
KSEKQEDLKKEMLELEKLALELESLVESEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA
HHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCC
QLPKESQEESQELV
CCCCHHHHHHHCCC
>Mature Secondary Structure
MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHCCCHHHHEEEEEEE
SKNEQALQDANAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQTNREIENLQNEIKH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH
KSEKQEDLKKEMLELEKLALELESLVESEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA
HHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCC
QLPKESQEESQELV
CCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA