Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is lgt [H]

Identifier: 188527776

GI number: 188527776

Start: 996196

End: 997050

Strand: Reverse

Name: lgt [H]

Synonym: HPSH_05035

Alternate gene names: 188527776

Gene position: 997050-996196 (Counterclockwise)

Preceding gene: 188527777

Following gene: 188527775

Centisome position: 61.98

GC content: 40.58

Gene sequence:

>855_bases
ATGAACGCTTGGAATACGATTTATGATCAATTTAACCCTATCGCTTTTAGTCTTGGCAGTATTGAAGTGCATTGGTATGG
TTTGGCGTATGCGTGCGCGATTGTTACCGCTTTTTATATGGCGTTAAGAATGATCCAAAAAGACCCCAAGCGATTCCCCA
TTGAAAGGAAGGAATTTGAGAGTTATTTTCTATGGGCGGAGCTTGGCATCGTGCTAGGGGCAAGGGTAGGATACATTCTT
ATTTATGAGCCTAATTCCAGCTATTATTTGACGCATTTTTGGCAAATCTTTAACCCTTTTGATAGCAATGGGGATTTTGT
AGGCATTCGTGGGATGAGCTATCATGGGGGGTTGGTAGGGTTTTTGATCGCTTCGTATCTTTATAGCCGTAAGGATTTGA
AAAAGCTTTTGATCTATTTGGATTTGATTGCGATTAGCCTGCCTTTGGGGTATGTTTTTGGGAGGATTGGGAATTTTTTA
AACCAGGAGCTTGTGGGGAGGGTTGTCCCCAAAGACAGCCATTTAGGGCAAATCATAGGCATTATGGTGGGTAATGAATT
GCGCTATCCTAGCCAATTGATTGAAGCGTTTTTAGAGGGGGTTATCGTGTTTTTAATGGTTCTGTGGGCTAAAAAACACA
CCAAAACGCATGGGTTGCTTATTGTGGTTTATGGCTTGGGGTATTCCTTGATGCGCTTTATTGCGGAATTTTACAGAGAG
CCAGATAGCCAGATGGGGGTTTATTTTTTGAATTTGAGCATGGGGCAGATTTTAAGCTTGCTTATGGTGATTGTTTCGTT
AGGGATTTTATTGTATGCTACAAAAAATTCTAAAAAAATAAAGGGAAATCAATGA

Upstream 100 bases:

>100_bases
TTCAGCCAAACGCTTGATGCTCCATGCGCATAAAATCGCGCTACTAGGGTATGAATTTGAAGCGATCCCCCCTAAAGAAT
TTGAATTTTAAGGATTGATC

Downstream 100 bases:

>100_bases
AATTTTTGGATCAAGAAAAAAGAAGACAATTATTAAACGAGCGCCATTCTTGCAAGATGTTTGATAGCCATTATGAGTTC
TCTAGCGAAGAATTAGAAGA

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARVGYIL
IYEPNSSYYLTHFWQIFNPFDSNGDFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL
NQELVGRVVPKDSHLGQIIGIMVGNELRYPSQLIEAFLEGVIVFLMVLWAKKHTKTHGLLIVVYGLGYSLMRFIAEFYRE
PDSQMGVYFLNLSMGQILSLLMVIVSLGILLYATKNSKKIKGNQ

Sequences:

>Translated_284_residues
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARVGYIL
IYEPNSSYYLTHFWQIFNPFDSNGDFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL
NQELVGRVVPKDSHLGQIIGIMVGNELRYPSQLIEAFLEGVIVFLMVLWAKKHTKTHGLLIVVYGLGYSLMRFIAEFYRE
PDSQMGVYFLNLSMGQILSLLMVIVSLGILLYATKNSKKIKGNQ
>Mature_284_residues
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARVGYIL
IYEPNSSYYLTHFWQIFNPFDSNGDFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL
NQELVGRVVPKDSHLGQIIGIMVGNELRYPSQLIEAFLEGVIVFLMVLWAKKHTKTHGLLIVVYGLGYSLMRFIAEFYRE
PDSQMGVYFLNLSMGQILSLLMVIVSLGILLYATKNSKKIKGNQ

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family [H]

Homologues:

Organism=Escherichia coli, GI1789192, Length=292, Percent_Identity=30.8219178082192, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001640 [H]

Pfam domain/function: PF01790 LGT [H]

EC number: 2.4.99.- [C]

Molecular weight: Translated: 32442; Mature: 32442

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS01311 LGT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFE
CCCHHHHHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SYFLWAELGIVLGARVGYILIYEPNSSYYLTHFWQIFNPFDSNGDFVGIRGMSYHGGLVG
HHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
FLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFLNQELVGRVVPKDSHLGQIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IMVGNELRYPSQLIEAFLEGVIVFLMVLWAKKHTKTHGLLIVVYGLGYSLMRFIAEFYRE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHC
PDSQMGVYFLNLSMGQILSLLMVIVSLGILLYATKNSKKIKGNQ
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFE
CCCHHHHHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SYFLWAELGIVLGARVGYILIYEPNSSYYLTHFWQIFNPFDSNGDFVGIRGMSYHGGLVG
HHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
FLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFLNQELVGRVVPKDSHLGQIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IMVGNELRYPSQLIEAFLEGVIVFLMVLWAKKHTKTHGLLIVVYGLGYSLMRFIAEFYRE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHC
PDSQMGVYFLNLSMGQILSLLMVIVSLGILLYATKNSKKIKGNQ
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA