Click here to switch to the map view.

The map label for this gene is 188527773

Identifier: 188527773

GI number: 188527773

Start: 993652

End: 994266

Strand: Direct

Name: 188527773

Synonym: HPSH_05010

Alternate gene names: NA

Gene position: 993652-994266 (Clockwise)

Preceding gene: 188527769

Following gene: 188527774

Centisome position: 61.77

GC content: 38.05

Gene sequence:

>615_bases
ATGCAAGGGTTTCTTTTACAAACACAAAGCATAAGAGATGAAGATTTGATCGTGCGCATCTTAACCAAAAACCAGCTCAA
AACCCTCTATCGTTTCTATGGCAAACGCCATAGCGTGCTGAATGTGGGGCGTAAAATTGATTTTGAAGAAGAAAACGATG
ATAAATTTTTACCCAAGTTAAGGAATATTTTGCATTTAGGTTATCTTTGGGAAAGAGAAATGGAGCGCTTGTTTTTTTGG
CAACGCTTTTGCGCCCTCTTGTTCAAGCATTTAGAAGGCGTGTATTCTTTGGATAGTATCTATTTTGACACTTTAGATGA
TGGGGCTAACAAACTCGCCAAACAGCACCCCTTAAGAGTGATTTTAGAAATGTATGCCACGCTTTTGAATTTTGAAGGGC
GCTTGCAAAGTTACAATTCTTGTTTTTTATGCGATGCAAAATTAGAGCGTTCTGTCGCTTTAGCGCAAGGGTTTATTTTA
GCGCACCCCTCTTGTTTGAAAACTAAAAGCCTGAATTTAGAAAAAATCCAAGCTTTTTTTCGCACTCAAAGCACGATTGA
TTTAGAAATAGAAGAAGTGGAAGAATTATGGCGTACGCTGAATTTAGGGTTTTGA

Upstream 100 bases:

>100_bases
AAGAAATCTGCAAATCCCATGTTTTTCCTTAATTTTGCAGTTTTGTTAGGATTGTATCCAAGTTTTGCTTATAATAAACA
AAATTAGCTTAAGAGTAGTG

Downstream 100 bases:

>100_bases
AAGGTTAAAAATGAAATTTAAATTTTTGAATATAGATAATGAGAGCGGTTTTATTTTGATTGAAAAAGAATTGAAACGAT
TAAACATTCTCGCTCAAGTC

Product: putative recombination protein RecO

Products: NA

Alternate protein names: Recombination Protein Reco; Acyl-CoA Thioester Hydrolase

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQGFLLQTQSIRDEDLIVRILTKNQLKTLYRFYGKRHSVLNVGRKIDFEEENDDKFLPKLRNILHLGYLWEREMERLFFW
QRFCALLFKHLEGVYSLDSIYFDTLDDGANKLAKQHPLRVILEMYATLLNFEGRLQSYNSCFLCDAKLERSVALAQGFIL
AHPSCLKTKSLNLEKIQAFFRTQSTIDLEIEEVEELWRTLNLGF

Sequences:

>Translated_204_residues
MQGFLLQTQSIRDEDLIVRILTKNQLKTLYRFYGKRHSVLNVGRKIDFEEENDDKFLPKLRNILHLGYLWEREMERLFFW
QRFCALLFKHLEGVYSLDSIYFDTLDDGANKLAKQHPLRVILEMYATLLNFEGRLQSYNSCFLCDAKLERSVALAQGFIL
AHPSCLKTKSLNLEKIQAFFRTQSTIDLEIEEVEELWRTLNLGF
>Mature_204_residues
MQGFLLQTQSIRDEDLIVRILTKNQLKTLYRFYGKRHSVLNVGRKIDFEEENDDKFLPKLRNILHLGYLWEREMERLFFW
QRFCALLFKHLEGVYSLDSIYFDTLDDGANKLAKQHPLRVILEMYATLLNFEGRLQSYNSCFLCDAKLERSVALAQGFIL
AHPSCLKTKSLNLEKIQAFFRTQSTIDLEIEEVEELWRTLNLGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24165; Mature: 24165

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGFLLQTQSIRDEDLIVRILTKNQLKTLYRFYGKRHSVLNVGRKIDFEEENDDKFLPKL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHH
RNILHLGYLWEREMERLFFWQRFCALLFKHLEGVYSLDSIYFDTLDDGANKLAKQHPLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEMYATLLNFEGRLQSYNSCFLCDAKLERSVALAQGFILAHPSCLKTKSLNLEKIQAFF
HHHHHHHHHCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH
RTQSTIDLEIEEVEELWRTLNLGF
HCCCCEEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQGFLLQTQSIRDEDLIVRILTKNQLKTLYRFYGKRHSVLNVGRKIDFEEENDDKFLPKL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHH
RNILHLGYLWEREMERLFFWQRFCALLFKHLEGVYSLDSIYFDTLDDGANKLAKQHPLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEMYATLLNFEGRLQSYNSCFLCDAKLERSVALAQGFILAHPSCLKTKSLNLEKIQAFF
HHHHHHHHHCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH
RTQSTIDLEIEEVEELWRTLNLGF
HCCCCEEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA