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The map label for this gene is recR

Identifier: 188527748

GI number: 188527748

Start: 969830

End: 970411

Strand: Direct

Name: recR

Synonym: HPSH_04875

Alternate gene names: 188527748

Gene position: 969830-970411 (Clockwise)

Preceding gene: 188527746

Following gene: 188527749

Centisome position: 60.29

GC content: 37.11

Gene sequence:

>582_bases
ATGAATACTTATAAAAACAGCTTGAATCACTTTTTAAATTTAGTGGATTGTTTAGAAAAAATCCCCAATGTGGGTAAAAA
ATCCGCCTTTAAAATGGCATACCATTTGGGTTTAGAAAACCCCTATCTGGCGCTGAAAATCACGCACGCTTTAGAGAACG
CCCTAGAAAACCTTAAAAGATGTGCATCTTGTAACGCGCTCAGTGAGAGTGAAATTTGTGAGATTTGCTCTGATGAGAGC
CGGCAAAATTCTCAGCTTTGCATGGTTTTACACCCAAGAGATGTGTTTATTTTAGAGGATTTAAAGGATTTTTTAGGGCG
CTATTATGTGTTAAATTCTATAGAAGAAGTGGATTTTAACGCCCTAGAAAAACGCCTGATTGAAGAAAACATTAAAGAAA
TCATTTTTGCTTTCCCTCCCACTTTGGCTAATGATTCTTTGATGCTTTATATTGAAGATAAATTGCAGCATTTCCACCTC
ACTTTCACTAAAATCGCTCAAGGCGTGCCTACTGGAGTGAATTTTGAAAACATTGACTCAGTTTCGCTCTCAAGGGCGTT
TAATTCAAGGATCAAAGCATGA

Upstream 100 bases:

>100_bases
AACGCTTTATTAGCGCTTTTCATATTAAACCCTCTTTTAAAAAACAATAAAAGCCCTTTTAATGGCTTTCAAGTCAAGTT
AAGTTTGATATACTAACAAA

Downstream 100 bases:

>100_bases
ATTTAAATTTTATGCCCCTATTGCATGCTTATAACCATGCGAGCATTGATTTTCATTTCAATTCTAGCGCTAGGGATTTT
TGCGTGCATGAAGTGCCTTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEICEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHL
TFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA

Sequences:

>Translated_193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEICEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHL
TFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA
>Mature_193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKRCASCNALSESEICEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHL
TFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=192, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR [H]

EC number: NA

Molecular weight: Translated: 22062; Mature: 22062

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKR
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH
CASCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFN
HHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCH
VSLSRAFNSRIKA
HHHHHHHHHHCCC
>Mature Secondary Structure
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKR
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH
CASCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFN
HHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCH
VSLSRAFNSRIKA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA