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The map label for this gene is 188527739

Identifier: 188527739

GI number: 188527739

Start: 948877

End: 950457

Strand: Direct

Name: 188527739

Synonym: HPSH_04810

Alternate gene names: NA

Gene position: 948877-950457 (Clockwise)

Preceding gene: 188527738

Following gene: 188527745

Centisome position: 58.99

GC content: 43.07

Gene sequence:

>1581_bases
ATGAAACAAAATTTAAAGCCATTCAAAATGATTAAGGAAAATTTAATGACACAATCTCAAAAAGTAAGATTCTTAGCCCC
TTTAAGCCTAGCGTTGAGTTTGAGCTTCAATCAAGTGGGCGCTGAAGAAGATGGGGGCTTTATGACCTTTGGGTATGAAT
TAGGCCAGGTGGTCCAACAAGTGAAAAACCCGGGTAAAATCAAAGCCGAAGAATTAGCCGGCTTGTTAAACTCTACCACG
ACAAACAACGCCAACACTAGTATTGCAGGCACAGGAGGTAATGTCGCCGGGACTTTAGGCAACCTCTTTATGAACCAATT
AGGCAATTTGATTGATTTGTATCCTACTTTGAATACTAGTAGTATTCATCAATGTAATAGTGGTAGCGCTAATGGCACTA
CTGCTGCTGCTACTACTAGTAATTCTCCTTGTTTCCAAGGTAACCTGAGTCTTTATAACGAAATGGTTAGCTCTATCAAA
ACTTTGAGTCAAGATCTCAAAAACAATATCTTTCAAGGCAACAACAACACCACGAGCGCGAATCTCTCCAACCAGCTCAG
TAATCTTAACACCGCCAGCGTTTATTTGGCTTACATGAACTCGTTCTTAAACGCCAATAACCAAGCGGGTGGGATTTTTC
AAAATAACACTAATCAAGCTTATGGGAGTGGTGTTACCGCCCAACAAATCGCTTATGTCCTAAAGCAAGCTTCAATCACT
ATGGGGCCAAGCGGTAATAGCGGGGCTGCCGGTGCGTTTTTGGATGCCGCTTTAGCGCAACATGTTTTCAACTCTGCTAA
CGCTGGGAATGATTTGAGCGCTAAGGAATTCACTAGCTTGGTGCAAAATATCGTCGATACTTCTCAAAACGCTTTAACGC
TAGCCAACAACGCTAACATCAGCAATTCAACAGGCTATCAAGTGAGCTATGGCGGGAATATTGATCAAGCGCGCTCTACC
CAACTATTAAACAACACCACAAACACTTTGGCTAAAGTTAGCGCTTTGAATAACGAGCTTAAAGCTAACCAATGGCTTGG
GAATTTCGCTGCCGGTAACAGCTCTCAAGTGAATGCGTTTAACGGGTTTATCACTAAAATCGGTTATAAGCAATTCTTTG
GAGAAAACAAGAATGTGGGCTTACGCTACTACGGCTTCTTCAGCTATAACGGTGCGGGCGTGGGTAATGGCCCTACTTAC
AATCAAGTCAATTTGCTCACTTATGGGGTGGGGACTGATGTGCTTTACAATGTGTTTAGCCGCTCTTTTGGTAGCCGAAG
TCTTAATGCGGGATTCTTTGGGGGGATCCAACTCGCAGGGGATACTTACATCAGCACGCTAAAAAATAGCCCTCAGCTTG
CGAGCAGACCTACAGCGACAAAATTCCAATTCTTGTTTGATGTGGGGCTACGCATGAACTTTGGTATCTTGAAAAAAGAC
TTGAAAAGCCATAACCAGCATTCTATAGAAATCGGTGTGCAAATCCCTACGATTTACAACACTTATTATAAAGCTGGCGG
CGCTGAAGTGAAATACTTCCGCCCTTATAGCGTGTATTGGGTCTATGGCTACGCCTTCTAA

Upstream 100 bases:

>100_bases
TTATTACAAATCAGCAGGGACTACCGTGAAGTATTTCCGTCCTTATAGCGTTTATTGGTCTTATGGGTATTCATTCTAAG
AAAGGGGGGATCAGACAAAT

Downstream 100 bases:

>100_bases
AAAAGCTCAAGGCCTTTTATAGGCTTTGAACGAACCCTTTAACTCTCCGCTTTAAAACAACCCCAAAATCCTTATCTCAA
ATTAACCCCCTAAAGAACGC

Product: outer membrane protein HopB

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Adhesin; Outer Membrane Protein HopB; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HorA; Outer Membrane Protein HopD; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSTT
TNNANTSIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSSIHQCNSGSANGTTAAATTSNSPCFQGNLSLYNEMVSSIK
TLSQDLKNNIFQGNNNTTSANLSNQLSNLNTASVYLAYMNSFLNANNQAGGIFQNNTNQAYGSGVTAQQIAYVLKQASIT
MGPSGNSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANISNSTGYQVSYGGNIDQARST
QLLNNTTNTLAKVSALNNELKANQWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTY
NQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLKNSPQLASRPTATKFQFLFDVGLRMNFGILKKD
LKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF

Sequences:

>Translated_526_residues
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSTT
TNNANTSIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSSIHQCNSGSANGTTAAATTSNSPCFQGNLSLYNEMVSSIK
TLSQDLKNNIFQGNNNTTSANLSNQLSNLNTASVYLAYMNSFLNANNQAGGIFQNNTNQAYGSGVTAQQIAYVLKQASIT
MGPSGNSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANISNSTGYQVSYGGNIDQARST
QLLNNTTNTLAKVSALNNELKANQWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTY
NQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLKNSPQLASRPTATKFQFLFDVGLRMNFGILKKD
LKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
>Mature_526_residues
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSTT
TNNANTSIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSSIHQCNSGSANGTTAAATTSNSPCFQGNLSLYNEMVSSIK
TLSQDLKNNIFQGNNNTTSANLSNQLSNLNTASVYLAYMNSFLNANNQAGGIFQNNTNQAYGSGVTAQQIAYVLKQASIT
MGPSGNSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANISNSTGYQVSYGGNIDQARST
QLLNNTTNTLAKVSALNNELKANQWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTY
NQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLKNSPQLASRPTATKFQFLFDVGLRMNFGILKKD
LKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56441; Mature: 56441

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQ
CCCCCCHHHHHHHHHHHHHHCEEEEEEEEEEEEEEHHHCCCCCCCCEEEECHHHHHHHHH
VKNPGKIKAEELAGLLNSTTTNNANTSIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTS
HCCCCCEEHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCC
SIHQCNSGSANGTTAAATTSNSPCFQGNLSLYNEMVSSIKTLSQDLKNNIFQGNNNTTSA
CCCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NLSNQLSNLNTASVYLAYMNSFLNANNQAGGIFQNNTNQAYGSGVTAQQIAYVLKQASIT
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCEE
MGPSGNSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANI
ECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
SNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVSALNNELKANQWLGNFAAGNSSQVNAF
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHH
NGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFS
HHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
RSFGSRSLNAGFFGGIQLAGDTYISTLKNSPQLASRPTATKFQFLFDVGLRMNFGILKKD
HHCCCCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCHHHHHEEHHCCCCCHHHHHHH
LKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
HHCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCEEEEEEEEEEC
>Mature Secondary Structure
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQ
CCCCCCHHHHHHHHHHHHHHCEEEEEEEEEEEEEEHHHCCCCCCCCEEEECHHHHHHHHH
VKNPGKIKAEELAGLLNSTTTNNANTSIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTS
HCCCCCEEHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCC
SIHQCNSGSANGTTAAATTSNSPCFQGNLSLYNEMVSSIKTLSQDLKNNIFQGNNNTTSA
CCCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NLSNQLSNLNTASVYLAYMNSFLNANNQAGGIFQNNTNQAYGSGVTAQQIAYVLKQASIT
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCEE
MGPSGNSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANI
ECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
SNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVSALNNELKANQWLGNFAAGNSSQVNAF
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHH
NGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFS
HHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
RSFGSRSLNAGFFGGIQLAGDTYISTLKNSPQLASRPTATKFQFLFDVGLRMNFGILKKD
HHCCCCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCHHHHHEEHHCCCCCHHHHHHH
LKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
HHCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA