Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527720

Identifier: 188527720

GI number: 188527720

Start: 929094

End: 929471

Strand: Reverse

Name: 188527720

Synonym: HPSH_04710

Alternate gene names: NA

Gene position: 929471-929094 (Counterclockwise)

Preceding gene: 188527721

Following gene: 188527719

Centisome position: 57.78

GC content: 33.6

Gene sequence:

>378_bases
ATGCCTAACTCTCCCACCAAAAAAGACTGCACGCAATACAGCGAAAAACAGCTTTTTAATTTAATCAATCAATTAGAGCG
AAAAATCAAAAAGATGCAAAATGATAGAGCTTCTTTTAAAGAAAAAATGGCTAAAGAATTGGAAAAAAGGGATCAAAACT
TTAAGGATAAAATAGACGCATTAAATGAACTCTTGCAAAAAATCAGCCAAGCTTTTAATAATAAAAGAGATTGTTGTTTG
GGGCATGAGATCCCAAACCTTGAAACGCAACAAGCCATGAGAGATGCACTCAACAAAGAAACCGATTTGATTGTTGAAGA
TTTTTCTAGTTATAGCGATGAGAGAAAAAGGGCTTTGGGTGTTAAAACTCAATCTTAA

Upstream 100 bases:

>100_bases
CTCAAAAGCGCTTTTTAATCTTTAAGTTTTTATTTTCCTAATCTTTCTCGCTCTATCGCTTGCGCTATAATGAGCTGGTA
TTTTTAAAAAAGGATAAAGC

Downstream 100 bases:

>100_bases
AAAATCTTTTCAAAAAGATTTTGATAAATTGCTTTTGAATGGGTTTGATGATAGCGTTTTGAACAAGGTCATTCTGTCTT
TGAGAAAAAAAGAACCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPNSPTKKDCTQYSEKQLFNLINQLERKIKKMQNDRASFKEKMAKELEKRDQNFKDKIDALNELLQKISQAFNNKRDCCL
GHEIPNLETQQAMRDALNKETDLIVEDFSSYSDERKRALGVKTQS

Sequences:

>Translated_125_residues
MPNSPTKKDCTQYSEKQLFNLINQLERKIKKMQNDRASFKEKMAKELEKRDQNFKDKIDALNELLQKISQAFNNKRDCCL
GHEIPNLETQQAMRDALNKETDLIVEDFSSYSDERKRALGVKTQS
>Mature_124_residues
PNSPTKKDCTQYSEKQLFNLINQLERKIKKMQNDRASFKEKMAKELEKRDQNFKDKIDALNELLQKISQAFNNKRDCCLG
HEIPNLETQQAMRDALNKETDLIVEDFSSYSDERKRALGVKTQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14658; Mature: 14527

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSPTKKDCTQYSEKQLFNLINQLERKIKKMQNDRASFKEKMAKELEKRDQNFKDKIDA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LNELLQKISQAFNNKRDCCLGHEIPNLETQQAMRDALNKETDLIVEDFSSYSDERKRALG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
VKTQS
CCCCC
>Mature Secondary Structure 
PNSPTKKDCTQYSEKQLFNLINQLERKIKKMQNDRASFKEKMAKELEKRDQNFKDKIDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LNELLQKISQAFNNKRDCCLGHEIPNLETQQAMRDALNKETDLIVEDFSSYSDERKRALG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
VKTQS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA