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The map label for this gene is ptlC [H]

Identifier: 188527701

GI number: 188527701

Start: 908059

End: 910557

Strand: Reverse

Name: ptlC [H]

Synonym: HPSH_04615

Alternate gene names: 188527701

Gene position: 910557-908059 (Counterclockwise)

Preceding gene: 188527702

Following gene: 188527700

Centisome position: 56.61

GC content: 29.33

Gene sequence:

>2499_bases
ATGTTTCTTGGTTTAGAAGGTTTTAAAAAATTTATTTTCAATTTCTTAAGTTCTTGTATTCCTAGACAATATTCTTTAGT
TCAAGAAAACAATATTAATGGAAAATTTGATGAAAAGTTTGTGTTAACGCATAAAGGAAACTTAGTAGGAGCAATATCTT
TAAATGGAATAACTTATTCAAATTTTGATAAAGAAGATGTGGCTACACAATTTTTATACAGAACACAAGCTTTAAATGAA
TTGATAGATGGTGTTACTCTAAGAATTGTTGCTAAACGAAGAGATATAAAAACTCAAACTATTTACAACAAAGATGGCGT
GAGTAAATACGCTAAAAAAATTGTTAATGCTTATGAAAAAAATAAAGAATTTTATATCACGACTTACTATTTAATTATTG
AAACAAAAAGCGTCAATATAAAAGGGCTTTTAGAAAAGTGGAAAGCAAAAATGACTACTGATAAGTATGTAAATAATGAT
GAAGAGAAACCTTTAAAAGATAATCTTAAAAACTCAGAAGCACAAAAACAGGAAGCTTATAAAATAAAAAAGAATGCGGT
AGAAAATAAAGAATTGCAAGATAAAGCAACTCTTTTAGCTGAGATTTTAAATAAGATGAGTTCCATACTAACAGACTTTG
AGCCTAAATTTTTAAGTTCAGACGATCTATTGAATTTATACGCTGAATATTGTAATGGTCATTATTGTGATTTTAAATAC
AAACAAGGACGATTGAGCGATGGGAATATCCAATCTCATTTATATTTTAAAAAAGACCACTTTATACATGACTATAACGG
AATAGAGACTTTTAAGCGTTTTATTGCTGTGAAAGCTTATGATGTGGATAATATCACTTCTTTGGCTTTATCTAATCTTT
TGTGTGAAAAGTTTAACTTAGATATTTTGCTCACTATAGAAGCTATGGATAAAGAAAGAGCTTTGTTTTTTATTAGAGAG
CGTAAAAAACGCTCTAAAGATATTAGCTATCAAAATATAGAATATTTAGAGCAAATGGTTTCTACTGACAGAGCGCAAAT
ACAAAAAGTTAGTTTATCGATCATGGTTTTTGCTAATTCTAAAAAAGAATTAGATAAAAAATCAATTATTGTATATAACA
CTTTGAAAAAAGAAGGCTTTTCAGCGGTTTTAGAAAGCATCAATATGCGTCCTATATTTTTTTCATTTTTTCCTGAAAGA
AACTTTTTAAATTCACGCCTAAGACCTCAAACTAGCCAAAATATTGCTAGTTTGATTATGTTTGAAAAATATCAAGAAGG
CTTTAAAGAAAATAGTTGGGGGGATTGTCCTATCAGCGTGTTTAAAAATCAAAATGGATCAGCCCACTTTTTCAATTTTC
AAGCTAAGCAAGGTAGAGATAGAAACGACAATGTTGTAGGTCATACCATGATAATTGGTAGCACAGGGAGCGGTAAATCC
ACTTTTATTAGTTTTTTAATCGCCAATTTACTGACTAAATACGATATGAGCGTGGTAGCTCTTGACAGAATGAATGGTTT
GGAGATTATGACTGACTTTTTTGAAGGTCAATACAATACTGCTAATACAGATGGTGGTTTTTATATCAACCCTTTCAGTT
TAAAAGATACAGAAGAAAATAGGCAATTTCTAGCAAACTGGATTAAATTTATGCTCAATATTGATAGCAATAACCAACAA
GATAATAAGGCTTCTCAGTCTATAGATAAGGTTATTAGAGATACTTATAATTACATGGGTGAACAAAAAAATCAAATAAA
CTTATTAGAAATTGCCAAAAATTTAGGCTCTAGCGAACAAGATTTTAATGAGATTTTAAAATCACAAGGGGAAAAAGTCT
ATTTTAAAAAATTTCAAGATTGTTTAGACTTTTCTAAAAGTCCTTTAAGTGTGATCAATATGGATGTTTTTGCTAATGAT
AAAAAACTTATGGGGCTAATTGCTATGTATTTGTTCCACAAATTGTTTTTTGAAGCAAAGGAACACAACAAACCTTTTTT
TCTATTCATTGATGAAACTAAAGACTACATTATGCATCCTATAATGTTTAACTATATCGCTAACGCACTCGCTCAAGCTA
GAAAAATCAATGGAACACTTTGCATGGCGTTTCAAAAAATATCTCAAGTCAAAGAATTAGGTATTGATAAAGCAAAGAGT
TTGATAGGCAACCTTTCTCAAGTGATTATCTACCCCACAAAAGATACTGATGAACTAATAGAATGCGGTGTTCCATTAAG
CGATAGCGAAATCAATTTCTTACACAACACGGATATGAGAGCCAGACAAGTGCTAGTAAAAAATATCGTTACAAACGCTT
CAGCTTTTATTGAAATTGATTTAAAAAAAGATTTGCAAGAACTACTTTATATTCTTGATAGCAATGCTGGTAATAGAAAA
ATCCTCAATGATCTTAAAAAATCAAACCAAGAAACTTATAAGGAAGAGTATTTAAAAACTAAAATGAAAAAAGAAAGCGA
GAATATTCAATATGTATAA

Upstream 100 bases:

>100_bases
CATACTAGAATTTTTTGATGAAGATATTACAAACATTATTTTGGCAAACCTAACGCTAAAAAATGACACTAAAGAATATT
ATGCTTAAAGAGTTTTAAAA

Downstream 100 bases:

>100_bases
AAACTGCGTATTTATCATAGAAAGTCCCAATAAGATCGCTAAAATCAAAGAATTAACAGGAAGTTCATTTGTTTTTGCGA
CTGGTGGGCATTTTGTTGAG

Product: DNA transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 832; Mature: 832

Protein sequence:

>832_residues
MFLGLEGFKKFIFNFLSSCIPRQYSLVQENNINGKFDEKFVLTHKGNLVGAISLNGITYSNFDKEDVATQFLYRTQALNE
LIDGVTLRIVAKRRDIKTQTIYNKDGVSKYAKKIVNAYEKNKEFYITTYYLIIETKSVNIKGLLEKWKAKMTTDKYVNND
EEKPLKDNLKNSEAQKQEAYKIKKNAVENKELQDKATLLAEILNKMSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKY
KQGRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLCEKFNLDILLTIEAMDKERALFFIRE
RKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMVFANSKKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPER
NFLNSRLRPQTSQNIASLIMFEKYQEGFKENSWGDCPISVFKNQNGSAHFFNFQAKQGRDRNDNVVGHTMIIGSTGSGKS
TFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDTEENRQFLANWIKFMLNIDSNNQQ
DNKASQSIDKVIRDTYNYMGEQKNQINLLEIAKNLGSSEQDFNEILKSQGEKVYFKKFQDCLDFSKSPLSVINMDVFAND
KKLMGLIAMYLFHKLFFEAKEHNKPFFLFIDETKDYIMHPIMFNYIANALAQARKINGTLCMAFQKISQVKELGIDKAKS
LIGNLSQVIIYPTKDTDELIECGVPLSDSEINFLHNTDMRARQVLVKNIVTNASAFIEIDLKKDLQELLYILDSNAGNRK
ILNDLKKSNQETYKEEYLKTKMKKESENIQYV

Sequences:

>Translated_832_residues
MFLGLEGFKKFIFNFLSSCIPRQYSLVQENNINGKFDEKFVLTHKGNLVGAISLNGITYSNFDKEDVATQFLYRTQALNE
LIDGVTLRIVAKRRDIKTQTIYNKDGVSKYAKKIVNAYEKNKEFYITTYYLIIETKSVNIKGLLEKWKAKMTTDKYVNND
EEKPLKDNLKNSEAQKQEAYKIKKNAVENKELQDKATLLAEILNKMSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKY
KQGRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLCEKFNLDILLTIEAMDKERALFFIRE
RKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMVFANSKKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPER
NFLNSRLRPQTSQNIASLIMFEKYQEGFKENSWGDCPISVFKNQNGSAHFFNFQAKQGRDRNDNVVGHTMIIGSTGSGKS
TFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDTEENRQFLANWIKFMLNIDSNNQQ
DNKASQSIDKVIRDTYNYMGEQKNQINLLEIAKNLGSSEQDFNEILKSQGEKVYFKKFQDCLDFSKSPLSVINMDVFAND
KKLMGLIAMYLFHKLFFEAKEHNKPFFLFIDETKDYIMHPIMFNYIANALAQARKINGTLCMAFQKISQVKELGIDKAKS
LIGNLSQVIIYPTKDTDELIECGVPLSDSEINFLHNTDMRARQVLVKNIVTNASAFIEIDLKKDLQELLYILDSNAGNRK
ILNDLKKSNQETYKEEYLKTKMKKESENIQYV
>Mature_832_residues
MFLGLEGFKKFIFNFLSSCIPRQYSLVQENNINGKFDEKFVLTHKGNLVGAISLNGITYSNFDKEDVATQFLYRTQALNE
LIDGVTLRIVAKRRDIKTQTIYNKDGVSKYAKKIVNAYEKNKEFYITTYYLIIETKSVNIKGLLEKWKAKMTTDKYVNND
EEKPLKDNLKNSEAQKQEAYKIKKNAVENKELQDKATLLAEILNKMSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKY
KQGRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLCEKFNLDILLTIEAMDKERALFFIRE
RKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMVFANSKKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPER
NFLNSRLRPQTSQNIASLIMFEKYQEGFKENSWGDCPISVFKNQNGSAHFFNFQAKQGRDRNDNVVGHTMIIGSTGSGKS
TFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDTEENRQFLANWIKFMLNIDSNNQQ
DNKASQSIDKVIRDTYNYMGEQKNQINLLEIAKNLGSSEQDFNEILKSQGEKVYFKKFQDCLDFSKSPLSVINMDVFAND
KKLMGLIAMYLFHKLFFEAKEHNKPFFLFIDETKDYIMHPIMFNYIANALAQARKINGTLCMAFQKISQVKELGIDKAKS
LIGNLSQVIIYPTKDTDELIECGVPLSDSEINFLHNTDMRARQVLVKNIVTNASAFIEIDLKKDLQELLYILDSNAGNRK
ILNDLKKSNQETYKEEYLKTKMKKESENIQYV

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 96333; Mature: 96333

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLGLEGFKKFIFNFLSSCIPRQYSLVQENNINGKFDEKFVLTHKGNLVGAISLNGITYS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCEEEC
NFDKEDVATQFLYRTQALNELIDGVTLRIVAKRRDIKTQTIYNKDGVSKYAKKIVNAYEK
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHCCCCHHEEECCCHHHHHHHHHHHHHHC
NKEFYITTYYLIIETKSVNIKGLLEKWKAKMTTDKYVNNDEEKPLKDNLKNSEAQKQEAY
CCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHCCCCHHHHHHHH
KIKKNAVENKELQDKATLLAEILNKMSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
KQGRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLCEKFNL
CCCCCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCC
DILLTIEAMDKERALFFIRERKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMVFANS
EEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHEEEEEEEEECC
KKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPERNFLNSRLRPQTSQNIASLIM
HHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHH
FEKYQEGFKENSWGDCPISVFKNQNGSAHFFNFQAKQGRDRNDNVVGHTMIIGSTGSGKS
HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHH
TFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDTEEN
HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHH
RQFLANWIKFMLNIDSNNQQDNKASQSIDKVIRDTYNYMGEQKNQINLLEIAKNLGSSEQ
HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
DFNEILKSQGEKVYFKKFQDCLDFSKSPLSVINMDVFANDKKLMGLIAMYLFHKLFFEAK
HHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
EHNKPFFLFIDETKDYIMHPIMFNYIANALAQARKINGTLCMAFQKISQVKELGIDKAKS
HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHH
LIGNLSQVIIYPTKDTDELIECGVPLSDSEINFLHNTDMRARQVLVKNIVTNASAFIEID
HHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEE
LKKDLQELLYILDSNAGNRKILNDLKKSNQETYKEEYLKTKMKKESENIQYV
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFLGLEGFKKFIFNFLSSCIPRQYSLVQENNINGKFDEKFVLTHKGNLVGAISLNGITYS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCEEEC
NFDKEDVATQFLYRTQALNELIDGVTLRIVAKRRDIKTQTIYNKDGVSKYAKKIVNAYEK
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHCCCCHHEEECCCHHHHHHHHHHHHHHC
NKEFYITTYYLIIETKSVNIKGLLEKWKAKMTTDKYVNNDEEKPLKDNLKNSEAQKQEAY
CCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHCCCCHHHHHHHH
KIKKNAVENKELQDKATLLAEILNKMSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
KQGRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLCEKFNL
CCCCCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCC
DILLTIEAMDKERALFFIRERKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMVFANS
EEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHEEEEEEEEECC
KKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPERNFLNSRLRPQTSQNIASLIM
HHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHH
FEKYQEGFKENSWGDCPISVFKNQNGSAHFFNFQAKQGRDRNDNVVGHTMIIGSTGSGKS
HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHH
TFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDTEEN
HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHH
RQFLANWIKFMLNIDSNNQQDNKASQSIDKVIRDTYNYMGEQKNQINLLEIAKNLGSSEQ
HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
DFNEILKSQGEKVYFKKFQDCLDFSKSPLSVINMDVFANDKKLMGLIAMYLFHKLFFEAK
HHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
EHNKPFFLFIDETKDYIMHPIMFNYIANALAQARKINGTLCMAFQKISQVKELGIDKAKS
HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHH
LIGNLSQVIIYPTKDTDELIECGVPLSDSEINFLHNTDMRARQVLVKNIVTNASAFIEID
HHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEE
LKKDLQELLYILDSNAGNRKILNDLKKSNQETYKEEYLKTKMKKESENIQYV
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]