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The map label for this gene is trbI [H]

Identifier: 188527696

GI number: 188527696

Start: 902243

End: 903478

Strand: Reverse

Name: trbI [H]

Synonym: HPSH_04590

Alternate gene names: 188527696

Gene position: 903478-902243 (Counterclockwise)

Preceding gene: 188527697

Following gene: 188527695

Centisome position: 56.17

GC content: 34.79

Gene sequence:

>1236_bases
ATGAAAAAACTTCTTTTACTTTTAGAGCATAAAATCATAAAAATTGGCTTAATTATTGTGATTGTATTAGCTGGTTTTTT
TCTTTTTTACGAACAAGAAATCAAAGAAAAAGCTGTTAATGTTTCTCAAGGTAAATTCCCTACTTCATCTTATTTGTTTC
AAGCTTACGAAGGCATTAAGAATAAAATAGATACTATCAATGAAGTGAAACCAAACGATGAAACTAAAAGCGTTAATGAG
AATATAGAAAAAACACAAAAAGATTTAGATGATTTTAATGCGCTAGTGCAAAAATTACCAAATTTGCCTAAGGATTTTGA
TAAAACGCTTATTAAGCCACAAAGTCCATCCTTCAATTACAATACCGCTAACGAAGAAGAAAAAACCCGCCTTGTGATTT
TAGCGTCTCGTGTTAGCAGCCAAAAAGAAACACAGCCTCCAACCTCTATAAAAAATAGTGTTTCTAATACAAAATACAAA
GAAAAACAAGAACTTGAAAAAGAATACGGCTCTAGCGGTTTTAAAAATTTTAAAAGAAAAAATGTAGCTAGCAGTGAAAA
CAAACTTTTGAGAACGATTACAGCTGACAGAATGATCCCAGCCATTCTGATCACTCCTATTAGTAGTGAAATAGGGGGGA
GTAAGATAGTCGCTCAAGTGGAGAGTGATATATACGCAACGATGGGTAGAGCGGTTTTAATCCCTAAAGGGAGTAGAGCC
ATAGGTTATTACAACTCTAATAACAAAATAGGAGAATACCGCTTAGGAATTGCTTGGAATAGGATAATCACGCCACAAGG
GGTCAATATTATACTAAGCGATGCTAAGGGGGCTGATATCAAGGGCTATAACGGCATGATAGGCACACTCCATAACAAAT
ATTGGGAACGCTATGGTATTCCTTTATCCTTAAGCACCTTGTCAAATGGGCTACTCATAGGTCTTACTAGCGGTCTTACC
GAAGCGATGAAAAACAAAAAGGGTGGTTTTAACCAAAACTATTTTGGAGATTACATGATGATGCAAATGACGAGGCAAAC
TGGTATCAGCCTAAATGATATTATCGCTCAAATCATGCGAGAGCAAATCAGGATTAAGCCCATTATCACTATTAGAGAAG
GAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCTAAAAACAATGAAGTCTTAGCGAAATTTTTT
AATGAAGAAAAGGAGCAAAACAATGATACAAAATAG

Upstream 100 bases:

>100_bases
CAAAAACCACTGATGGTTTAGAGAATAATAAAAAGGGGATGAATAACACCCCAAAACAAAATCAAGCAAACCCTATTAAA
GAGATTAAAGAAAACAAGAA

Downstream 100 bases:

>100_bases
CACTATTAATAATAATTTTATTCTAAATAGTGTAAAATTAAAATATAATATTAAACATAAGGATTACCAATGAAACTCAA
CCCTAAAGAAGAATTATTGA

Product: ComB3 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTINEVKPNDETKSVNE
NIEKTQKDLDDFNALVQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYK
EKQELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA
IGYYNSNNKIGEYRLGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT
EAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF
NEEKEQNNDTK

Sequences:

>Translated_411_residues
MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTINEVKPNDETKSVNE
NIEKTQKDLDDFNALVQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYK
EKQELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA
IGYYNSNNKIGEYRLGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT
EAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF
NEEKEQNNDTK
>Mature_411_residues
MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTINEVKPNDETKSVNE
NIEKTQKDLDDFNALVQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYK
EKQELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA
IGYYNSNNKIGEYRLGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT
EAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF
NEEKEQNNDTK

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 46421; Mature: 46421

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
NKIDTINEVKPNDETKSVNENIEKTQKDLDDFNALVQKLPNLPKDFDKTLIKPQSPSFNY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
NTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYKEKQELEKEYGSSGFKNFKRK
CCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
NVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA
CCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCE
IGYYNSNNKIGEYRLGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGI
EEEECCCCCCCEEEEEEEECEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
PLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMR
CEEHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
EQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
HHHCCCEEEEEECCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
NKIDTINEVKPNDETKSVNENIEKTQKDLDDFNALVQKLPNLPKDFDKTLIKPQSPSFNY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
NTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYKEKQELEKEYGSSGFKNFKRK
CCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
NVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA
CCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCE
IGYYNSNNKIGEYRLGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGI
EEEECCCCCCCEEEEEEEECEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
PLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMR
CEEHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
EQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNNDTK
HHHCCCEEEEEECCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]