| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527681
Identifier: 188527681
GI number: 188527681
Start: 892053
End: 892709
Strand: Direct
Name: 188527681
Synonym: HPSH_04515
Alternate gene names: NA
Gene position: 892053-892709 (Clockwise)
Preceding gene: 188527680
Following gene: 188527682
Centisome position: 55.46
GC content: 36.99
Gene sequence:
>657_bases ATGATAATCACCATAGCTAATGAAAAAGGAGGGAGCGGTAAATCCACTTTGTGCTTGAACTTGTGTATTCAATTATTGTT AGGCAAGAAAGACATTGCCGCATTAGACACTGATAGTCAAAAGAGTTTGGAAGTGTTCAATAATATTAGGAGTGAAACAA GTTTGCCCAATTTCACGCTCTTTAATCGCACAGGTAATATCACAGACACCTTAAAACAGATGATGGATAAATACGAATAC ATCCTTATTGATACTAAGGGCGAACATTCTAAAGAAAGCCAAAGGGCTATGCTATTGAGCGATTGGGTGCTAATACCCAC CACGCCAAGCCAACTAGACACAGCGGTGCTATTAGACATGCTAGAAAGGATTAGAGACATCCAAGCGTTGAATGAAAACT TAAAAGCTTGTATTGTGATGAACCGCATCCCTACTATCCCCACTCTTAAAGAGAAAAAAGCTCTCATTGATTTTATCAAC CAAAATAACGCTAATGAAAGCGTGTTTTTAATGGATAATATATTAAGCGAAAGGATAGCTTATAAGCGTTCAGTGAGTGA AGGTATGGGTGTGATGGAATACAATGATAATAAAGCTAAAAACGAATGGTCTCAATTTTATGATGAATTGAGCGGGTATT TAAGGATCAAAAAATGA
Upstream 100 bases:
>100_bases TAACTATTTACAATAACATATTATTAAGTTTTTCTATTTTATATACTTTTAAGCTATTTATCTTTAAAATATGTTTAACA AAATGATAAGGGAATAAGAG
Downstream 100 bases:
>100_bases TGAAATGGTAGAATTTATAGTTTAATTCTAAATAACGCTTAATTGTGTTATGATATTAAAAACAATCTACTTTAAAGGAT AAATATGGAATTTAAAAACA
Product: PARA protein
Products: NA
Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; Partition Protein; Plasmid Partitioning Protein; Plasmid Partition Protein ParA-Like Protein; Partitioning Protein; PARA Protein; Plasmid Stability Protein ParA; Plasmid Stability/Partitioning Protein; Plasmid Partitioning Protein F; ATPases Involved In Chromosome Partitioning; ParA Family Protein; CobQ/CobB/MinD/ParA Domain-Containing Protein; Plasmid Partition Protein A; Partitioning Protein ParA; Chromosome Partitioning ATPase; Partitioning Protein ParA Family; Chromosome Partitioning ATPase ParA; ATPase Involved In Chromosome Partitioning-Like Protein; ATPase; YafB Protein; Chromosome Partitioning Protein; Partition Protein ATPase Activity; Chromosome Partitioning Protein ParA; Partitioning Protein ParA-Family; ParA Plasmid Partitioning Protein; ParA-Like Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIITIANEKGGSGKSTLCLNLCIQLLLGKKDIAALDTDSQKSLEVFNNIRSETSLPNFTLFNRTGNITDTLKQMMDKYEY ILIDTKGEHSKESQRAMLLSDWVLIPTTPSQLDTAVLLDMLERIRDIQALNENLKACIVMNRIPTIPTLKEKKALIDFIN QNNANESVFLMDNILSERIAYKRSVSEGMGVMEYNDNKAKNEWSQFYDELSGYLRIKK
Sequences:
>Translated_218_residues MIITIANEKGGSGKSTLCLNLCIQLLLGKKDIAALDTDSQKSLEVFNNIRSETSLPNFTLFNRTGNITDTLKQMMDKYEY ILIDTKGEHSKESQRAMLLSDWVLIPTTPSQLDTAVLLDMLERIRDIQALNENLKACIVMNRIPTIPTLKEKKALIDFIN QNNANESVFLMDNILSERIAYKRSVSEGMGVMEYNDNKAKNEWSQFYDELSGYLRIKK >Mature_218_residues MIITIANEKGGSGKSTLCLNLCIQLLLGKKDIAALDTDSQKSLEVFNNIRSETSLPNFTLFNRTGNITDTLKQMMDKYEY ILIDTKGEHSKESQRAMLLSDWVLIPTTPSQLDTAVLLDMLERIRDIQALNENLKACIVMNRIPTIPTLKEKKALIDFIN QNNANESVFLMDNILSERIAYKRSVSEGMGVMEYNDNKAKNEWSQFYDELSGYLRIKK
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24822; Mature: 24822
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITIANEKGGSGKSTLCLNLCIQLLLGKKDIAALDTDSQKSLEVFNNIRSETSLPNFTL CEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHCCCCCEEE FNRTGNITDTLKQMMDKYEYILIDTKGEHSKESQRAMLLSDWVLIPTTPSQLDTAVLLDM ECCCCCHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHH LERIRDIQALNENLKACIVMNRIPTIPTLKEKKALIDFINQNNANESVFLMDNILSERIA HHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH YKRSVSEGMGVMEYNDNKAKNEWSQFYDELSGYLRIKK HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure MIITIANEKGGSGKSTLCLNLCIQLLLGKKDIAALDTDSQKSLEVFNNIRSETSLPNFTL CEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHCCCCCEEE FNRTGNITDTLKQMMDKYEYILIDTKGEHSKESQRAMLLSDWVLIPTTPSQLDTAVLLDM ECCCCCHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHH LERIRDIQALNENLKACIVMNRIPTIPTLKEKKALIDFINQNNANESVFLMDNILSERIA HHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH YKRSVSEGMGVMEYNDNKAKNEWSQFYDELSGYLRIKK HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA