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The map label for this gene is 188527623

Identifier: 188527623

GI number: 188527623

Start: 823481

End: 823708

Strand: Direct

Name: 188527623

Synonym: HPSH_04225

Alternate gene names: NA

Gene position: 823481-823708 (Clockwise)

Preceding gene: 188527622

Following gene: 188527624

Centisome position: 51.19

GC content: 33.33

Gene sequence:

>228_bases
ATGGAAAACAAATCAATAGGACAGATTTTCAAAGACAGCTTCAAAAAAAGTTTCTTTAGTGGTCTATGGAGTTGCTTAAA
ATGGAGCTTTATTCTCACTCTGATCAGCTTGGGTTTGTTTTTGCTTGTTTTTAGGTTTCAACCTGAGACTATTAAAAAAT
ACATCAAAGATCCTAAAGATCTACAATTCTACAATGACTTGAGAAACAAAAAGGGTTGGGACAAGTAG

Upstream 100 bases:

>100_bases
TCAAATGCAATGCTAATGGTTGGAAGCAAGGTGAGTGCATGAAGCGTTCTAAAAATAGTTTGGTTTGTGTGTGTTTGTAA
TTTAGGTGTTTGTGATCCAC

Downstream 100 bases:

>100_bases
GTTTATTGTTTCTAAATGGTGTCAATTGTCAAACAAAAGTGTCGGTTTTTATTTGAATCAAAAAGGATACACGCAAAGAC
CAGTTAATCTAGTGGCGCTT

Product: cag pathogenicity island protein (cagB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MENKSIGQIFKDSFKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKDLQFYNDLRNKKGWDK

Sequences:

>Translated_75_residues
MENKSIGQIFKDSFKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKDLQFYNDLRNKKGWDK
>Mature_75_residues
MENKSIGQIFKDSFKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKDLQFYNDLRNKKGWDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9017; Mature: 9017

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKSIGQIFKDSFKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHH
LQFYNDLRNKKGWDK
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MENKSIGQIFKDSFKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHH
LQFYNDLRNKKGWDK
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA