| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ogt [H]
Identifier: 188527477
GI number: 188527477
Start: 666524
End: 667030
Strand: Direct
Name: ogt [H]
Synonym: HPSH_03485
Alternate gene names: 188527477
Gene position: 666524-667030 (Clockwise)
Preceding gene: 188527476
Following gene: 188527498
Centisome position: 41.44
GC content: 37.28
Gene sequence:
>507_bases ATGTTTTTATACCACTACTATTTTAAGACCCCTAAGAGTTTCCCTTTAGAGTATTTGCATTTGTGCGCTAATGAGAGCCA TTTATTAAGATTGGATTTTGATGCGACCAATTTTTCTCATAACACCCCTATGAATACCCCATTAAAACTCAGCGTTCAAG CCTTGGAGCGTTATTTCTTGGGGCAACTTTTTGAATTTAACGCGCCTTTAGATTTGATAGGGACTTTTTTTCAAAAACAA GTTTGGTCTGCGTTAATGACTATCCCTTATGGCAAGACAAAAAGTTACGATGAAATCGCAAAGCTCATTAATAACCCTAG ATCTTGCAGGGCCATTGGCAACGCTAATCGCAATAACCCTATTTCTTTGATCGTGCCTTGTCATAGAGTGGTGCGTAAAA ATGGCGCTTTAGGGGGGTATAATGGGGGCATAGAAGTCAAAAAGTGGCTGTTAGAATTTGAAAGTAAAATTTTAAACCAG CAAGCTAAAAACTTTTTAATTTCTTAA
Upstream 100 bases:
>100_bases GATCATGGGGCTTTTGAATGAAAAAATGCATAAAGCTTTGATTTTGGGGGTGTATGGTTTGTCGCTATTGATTGTTTTAT ACAAACTCTTTTTTTAATTG
Downstream 100 bases:
>100_bases AAAATGGGGCTTTGATTATTTTATGGTAAAAATCATTTTTTTAAGGGAGTAGGGGGGTGGTTTTAATTTTCTTCCCAAAT GCTCGCCGCTTCTTCTAAAC
Product: methylated-DNA--protein-cysteine methyltransferase (dat1)
Products: NA
Alternate protein names: 6-O-methylguanine-DNA methyltransferase; MGMT; O-6-methylguanine-DNA-alkyltransferase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MFLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNAPLDLIGTFFQKQ VWSALMTIPYGKTKSYDEIAKLINNPRSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNQ QAKNFLIS
Sequences:
>Translated_168_residues MFLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNAPLDLIGTFFQKQ VWSALMTIPYGKTKSYDEIAKLINNPRSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNQ QAKNFLIS >Mature_168_residues MFLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNAPLDLIGTFFQKQ VWSALMTIPYGKTKSYDEIAKLINNPRSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNQ QAKNFLIS
Specific function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a sui
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MGMT family [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=86, Percent_Identity=41.8604651162791, Blast_Score=90, Evalue=1e-18, Organism=Escherichia coli, GI1787596, Length=133, Percent_Identity=39.8496240601504, Blast_Score=103, Evalue=6e-24, Organism=Escherichia coli, GI1788542, Length=134, Percent_Identity=41.044776119403, Blast_Score=102, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115533068, Length=84, Percent_Identity=46.4285714285714, Blast_Score=80, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115533070, Length=84, Percent_Identity=46.4285714285714, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320001, Length=103, Percent_Identity=37.8640776699029, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF01035 DNA_binding_1; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 19349; Mature: 19349
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFL CEEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH GQLFEFNAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPRSCRAIGNANRNNP HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC ISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNQQAKNFLIS EEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFL CEEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH GQLFEFNAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPRSCRAIGNANRNNP HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC ISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNQQAKNFLIS EEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]