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The map label for this gene is ygdL [C]

Identifier: 188527402

GI number: 188527402

Start: 584576

End: 585235

Strand: Reverse

Name: ygdL [C]

Synonym: HPSH_03055

Alternate gene names: 188527402

Gene position: 585235-584576 (Counterclockwise)

Preceding gene: 188527403

Following gene: 188527401

Centisome position: 36.38

GC content: 40.0

Gene sequence:

>660_bases
TTGTCTGAACCCATAGATAGATTCACGCGCATAAGGTGGTTGTTTAAAAACGATTTTGAAAAAATCCGCCGACAAAAGGT
TTTAATCTGTGGCGTGGGGGGCGTTGGAGGCTTTGCACTAGACGCTTTGTATCGTGTGGGGATAGGGCAAATCACTATCA
TTGATAAAGATGCGTTTGATGTTACCAATCAAAACCGCCAGATTGGATCAGAAAGGATAGGAGAATCTAAAGTGTTGGTG
TTGCAAGATCTCTATAAGGGCATTCAAGCTTTGAATTTGCATATAGATGAAGCGTTTTTAAATTCATTTAATTTTAGAGA
TTATGATTACATTTTAGATTGCATGGACGATTTGCCTATTAAAACGAGCTTAGCGATCAAATGTCAAAATTTCGCTTACG
GGAAATTTATCAGCTCTATGGGGAGCGCGAAACGCTTGAACCCTAAACACATCCAAGTGGGGAGCGTTTGGGAAAGCTAT
GGCGATAAATTCGGGCGTAAATTTAGGGATTTCTTAAAAAAACGCCGTTTTAAAGGGGATTTTAAAGTGGTTTTTAGCCC
TGAAGTCCCGCATTGCATAGAGCTTGGGAGTTTTAATGCGGTTACGGCGAGTTTTGGTTTGCAAATAGCGAGTGAAGTCG
TGCAAGACATTATTAAATAA

Upstream 100 bases:

>100_bases
CAATCACAAATGCATAAGGCTAAAAAGATTCAAAAATTTTTGTTTTAGATTTTTTAAACTACGATACAATAAAAGCACTA
TTTTTATTGAAGGCTAAAGA

Downstream 100 bases:

>100_bases
GGTATTATCAACAATGAAAGGAAGTGGAATGAAAGATTACGAAGACGAATTGGAAGATTTTGAAGAAGAAGAATTAGAGG
GCTTTGAAGAAGAAGATGAA

Product: molybdopterin biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSEPIDRFTRIRWLFKNDFEKIRRQKVLICGVGGVGGFALDALYRVGIGQITIIDKDAFDVTNQNRQIGSERIGESKVLV
LQDLYKGIQALNLHIDEAFLNSFNFRDYDYILDCMDDLPIKTSLAIKCQNFAYGKFISSMGSAKRLNPKHIQVGSVWESY
GDKFGRKFRDFLKKRRFKGDFKVVFSPEVPHCIELGSFNAVTASFGLQIASEVVQDIIK

Sequences:

>Translated_219_residues
MSEPIDRFTRIRWLFKNDFEKIRRQKVLICGVGGVGGFALDALYRVGIGQITIIDKDAFDVTNQNRQIGSERIGESKVLV
LQDLYKGIQALNLHIDEAFLNSFNFRDYDYILDCMDDLPIKTSLAIKCQNFAYGKFISSMGSAKRLNPKHIQVGSVWESY
GDKFGRKFRDFLKKRRFKGDFKVVFSPEVPHCIELGSFNAVTASFGLQIASEVVQDIIK
>Mature_218_residues
SEPIDRFTRIRWLFKNDFEKIRRQKVLICGVGGVGGFALDALYRVGIGQITIIDKDAFDVTNQNRQIGSERIGESKVLVL
QDLYKGIQALNLHIDEAFLNSFNFRDYDYILDCMDDLPIKTSLAIKCQNFAYGKFISSMGSAKRLNPKHIQVGSVWESYG
DKFGRKFRDFLKKRRFKGDFKVVFSPEVPHCIELGSFNAVTASFGLQIASEVVQDIIK

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=166, Percent_Identity=31.3253012048193, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321903, Length=106, Percent_Identity=39.622641509434, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 24963; Mature: 24832

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPIDRFTRIRWLFKNDFEKIRRQKVLICGVGGVGGFALDALYRVGIGQITIIDKDAFD
CCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCC
VTNQNRQIGSERIGESKVLVLQDLYKGIQALNLHIDEAFLNSFNFRDYDYILDCMDDLPI
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
KTSLAIKCQNFAYGKFISSMGSAKRLNPKHIQVGSVWESYGDKFGRKFRDFLKKRRFKGD
CCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FKVVFSPEVPHCIELGSFNAVTASFGLQIASEVVQDIIK
EEEEECCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SEPIDRFTRIRWLFKNDFEKIRRQKVLICGVGGVGGFALDALYRVGIGQITIIDKDAFD
CCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCC
VTNQNRQIGSERIGESKVLVLQDLYKGIQALNLHIDEAFLNSFNFRDYDYILDCMDDLPI
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
KTSLAIKCQNFAYGKFISSMGSAKRLNPKHIQVGSVWESYGDKFGRKFRDFLKKRRFKGD
CCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FKVVFSPEVPHCIELGSFNAVTASFGLQIASEVVQDIIK
EEEEECCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]