Click here to switch to the map view.

The map label for this gene is 188527334

Identifier: 188527334

GI number: 188527334

Start: 523665

End: 524126

Strand: Reverse

Name: 188527334

Synonym: HPSH_02705

Alternate gene names: NA

Gene position: 524126-523665 (Counterclockwise)

Preceding gene: 188527336

Following gene: 188527333

Centisome position: 32.58

GC content: 35.06

Gene sequence:

>462_bases
ATGGAACAAAATATTTTCTCCTTACTCATTCAAAAAAAGTCTTATAAAAAGCTTGAAACTCTTTTGAAACTCAAAAAGCT
TAAGGTTTTTATGCCTTTAAGTTTACAAGAAAATTTGCTTTTTATCTTCATAAAAGACTCTAAATTGCTTTTTGCGTTTA
AAGATCTTTGGGCTTCTAAAGAATTTAACCAGCGATTCGCTAAAGAAATCAGCCATTTTTTAAACGCGCAAGGGCATGCT
TATGGGTTTGACGGGTTGAATGGGTTAGAAATTTTAGGCTATGTGCCTAAAGATTCCTTAGAAAAAGCCAATTTTTATGC
CCCCATTAAAAAACAAGCCCATTTTTTTCGCCCTAGCGCTTTAGGGTTGTTCCATAACCCCATTAAAGACGCTCGTTTGC
ATGAATGTTTTGAAAAAGCGCGCGCTTTGATCCACTACCAACGAAGTTTTTTTGAGGAATGA

Upstream 100 bases:

>100_bases
AAGTTTTTTTAGCGGGTTTTTCATTGAATGGGGGGGCTTTATAGCCGCAAGCTTGAATCGTTATTGCTACAAGCGTTAAA
AAGCATGTTAAGATCAGTTT

Downstream 100 bases:

>100_bases
ATGGCTGATTTATTGTCCAGTTTGAAAAACCTTTCTCATAGCAGTGGCGTGTATCAATATTTTGACAAAAACCACCAATT
ACTCTATATCGGTAAGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNAQGHA
YGFDGLNGLEILGYVPKDSLEKANFYAPIKKQAHFFRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE

Sequences:

>Translated_153_residues
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNAQGHA
YGFDGLNGLEILGYVPKDSLEKANFYAPIKKQAHFFRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE
>Mature_153_residues
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNAQGHA
YGFDGLNGLEILGYVPKDSLEKANFYAPIKKQAHFFRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18003; Mature: 18003

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHCCH
EFNQRFAKEISHFLNAQGHAYGFDGLNGLEILGYVPKDSLEKANFYAPIKKQAHFFRPSA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHCCCHH
LGLFHNPIKDARLHECFEKARALIHYQRSFFEE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHCCH
EFNQRFAKEISHFLNAQGHAYGFDGLNGLEILGYVPKDSLEKANFYAPIKKQAHFFRPSA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHCCCHH
LGLFHNPIKDARLHECFEKARALIHYQRSFFEE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA