| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is coaE
Identifier: 188527322
GI number: 188527322
Start: 512883
End: 513473
Strand: Direct
Name: coaE
Synonym: HPSH_02645
Alternate gene names: 188527322
Gene position: 512883-513473 (Clockwise)
Preceding gene: 188527321
Following gene: 188527323
Centisome position: 31.88
GC content: 37.23
Gene sequence:
>591_bases ATGGTTTTAAAAAACGCTATCGCTCTAACAGGGGGGATAGGCACCGGTAAAAGCACCACCATTAAAATATTAGAATCGCA AGGTTATCAAATTTTAGATGCGGATAAGATCGCTCATCAATTATTGCAAGAGCACCGGTTTAAAATCGCCCAACATTTTG GATCAGATATTTTAGAAAAGGATATTTTAAACAGAAAAAAACTTGGCGCTATCGTGTTTCAAAATGCTAATGAATTAAAA TGGCTAGAGGATTTTTTACACCCCTTAATCCGTGAGCGCATGCTTCAAAAAGCCTATGAATTAGAAAAGAATCATCAAGC GTATTTTTTAGACATCCCTTTGTTTTTTGAAGTGGGGGGTAAAAAATGCTATCCTGTGAGTAAAGTGGTTTTAATCTATG CACCCAGGGCCTTACAAATTGAGCGCCTTTTAGAGCGAGACAAACTCAAAGAAGCTGAAATCTTGCAGCGCTTAGCTTGT CAAATGGATATAGAGCAAAAACGCGCCATGAGCGATTGCATTATAGACAACAGCTCCAGCTTAAAAGATTTAAATAAGCA AGTTGAACGCTTTTTAAAAACGCTCTTATAA
Upstream 100 bases:
>100_bases CTAAAAAGCGTGAGATACTATAACGAAGACATTCATAGGGCTGCATTCGCTTTGCCTAAAAATTTACAAGAAGTCTTTAA AGACAATATCAAATCTTAAA
Downstream 100 bases:
>100_bases GCTCGTTTTGTATCTAAGCATGTTAAACTACCATTAAATTTTTTGTAAGGCTAAAAACATGATCACTTTAAAACAAGCCC TTTCTTTATCCCAAGATGAA
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MVLKNAIALTGGIGTGKSTTIKILESQGYQILDADKIAHQLLQEHRFKIAQHFGSDILEKDILNRKKLGAIVFQNANELK WLEDFLHPLIRERMLQKAYELEKNHQAYFLDIPLFFEVGGKKCYPVSKVVLIYAPRALQIERLLERDKLKEAEILQRLAC QMDIEQKRAMSDCIIDNSSSLKDLNKQVERFLKTLL
Sequences:
>Translated_196_residues MVLKNAIALTGGIGTGKSTTIKILESQGYQILDADKIAHQLLQEHRFKIAQHFGSDILEKDILNRKKLGAIVFQNANELK WLEDFLHPLIRERMLQKAYELEKNHQAYFLDIPLFFEVGGKKCYPVSKVVLIYAPRALQIERLLERDKLKEAEILQRLAC QMDIEQKRAMSDCIIDNSSSLKDLNKQVERFLKTLL >Mature_196_residues MVLKNAIALTGGIGTGKSTTIKILESQGYQILDADKIAHQLLQEHRFKIAQHFGSDILEKDILNRKKLGAIVFQNANELK WLEDFLHPLIRERMLQKAYELEKNHQAYFLDIPLFFEVGGKKCYPVSKVVLIYAPRALQIERLLERDKLKEAEILQRLAC QMDIEQKRAMSDCIIDNSSSLKDLNKQVERFLKTLL
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=189, Percent_Identity=31.7460317460317, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI191252795, Length=189, Percent_Identity=31.7460317460317, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI110227607, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=8e-16, Organism=Homo sapiens, GI110227605, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=9e-16, Organism=Homo sapiens, GI110227603, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=9e-16, Organism=Homo sapiens, GI110227601, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=9e-16, Organism=Homo sapiens, GI205277394, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=1e-15, Organism=Escherichia coli, GI1786292, Length=189, Percent_Identity=30.6878306878307, Blast_Score=92, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17554944, Length=197, Percent_Identity=29.4416243654822, Blast_Score=106, Evalue=6e-24, Organism=Caenorhabditis elegans, GI25143409, Length=196, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320402, Length=200, Percent_Identity=36.5, Blast_Score=99, Evalue=3e-22, Organism=Drosophila melanogaster, GI24644728, Length=183, Percent_Identity=34.9726775956284, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24658602, Length=197, Percent_Identity=31.4720812182741, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 22622; Mature: 22622
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLKNAIALTGGIGTGKSTTIKILESQGYQILDADKIAHQLLQEHRFKIAQHFGSDILEK CCCCCCEEEECCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHCHHHHHH DILNRKKLGAIVFQNANELKWLEDFLHPLIRERMLQKAYELEKNHQAYFLDIPLFFEVGG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECC KKCYPVSKVVLIYAPRALQIERLLERDKLKEAEILQRLACQMDIEQKRAMSDCIIDNSSS CCCCHHHHEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH LKDLNKQVERFLKTLL HHHHHHHHHHHHHHHC >Mature Secondary Structure MVLKNAIALTGGIGTGKSTTIKILESQGYQILDADKIAHQLLQEHRFKIAQHFGSDILEK CCCCCCEEEECCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHCHHHHHH DILNRKKLGAIVFQNANELKWLEDFLHPLIRERMLQKAYELEKNHQAYFLDIPLFFEVGG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECC KKCYPVSKVVLIYAPRALQIERLLERDKLKEAEILQRLACQMDIEQKRAMSDCIIDNSSS CCCCHHHHEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH LKDLNKQVERFLKTLL HHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]