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The map label for this gene is tatC [H]

Identifier: 188527196

GI number: 188527196

Start: 383722

End: 384483

Strand: Reverse

Name: tatC [H]

Synonym: HPSH_02015

Alternate gene names: 188527196

Gene position: 384483-383722 (Counterclockwise)

Preceding gene: 188527197

Following gene: 188527195

Centisome position: 23.9

GC content: 39.63

Gene sequence:

>762_bases
ATGTTTGAAGATTTAAAACCGCATTTACAGGAATTAAGAAAGCGTTTGATGGTTTCTGTAGGAACGATTCTAGTGGCGTT
TTTGGGGTGCTTTCATTTTTGGAAAAGTATTTTTGAATTCGTTAAAAATTCTTATAAAGGCACGCTCATCCAGCTCTCCC
CTATTGAAGGGGTCATGGTAGCGGTTAAAATCAGTTTTTCAGCCGCTATCGTCATTTCCATGCCCATTATTTTTTGGCAA
TTATGGCTCTTTATCGCTCCAGGGCTTTACAAGAATGAAAAAAAAGTGATTTTGCCTTTTGTGTTTTTTGGGAGCGGCAT
GTTTTTAATTGGGGCGGCATTTTCTTATTATGTGGTGTTCCCTTTCATCATTGAATACTTAGCCACTTTTGGGAGCGATG
TGTTTGCAGCTAATATTTCTGCGTCCAGTTATGTGAGCTTTTTCACGCGCTTGATTTTAGGCTTTGGTGTGGCGTTTGAA
TTGCCTGTTTTGGCGTATTTTTTGGCTAAAGTGGGCTTGATTACCGATGCGAGCTTGAAAGCGTATTTTAAATACGCTAT
TGTAGTGATTTTTATTGTAGCAGCCATTATCACTCCCCCTGATGTGGTGAGTCAAATCTTTATGGCGTTGCCCTTAGTGG
GGCTTTATGGGCTTTCTATTTTGATCGCCAAAATAGTCAATCCGTCTCCCAAAGACAACGAAAATAACAACGAAGAATAC
AACGAAAATAGCGCCAAAGAAAATGAAAAAAGCGAGTCGTAG

Upstream 100 bases:

>100_bases
GAAGAAGCCCTAAACAAAGAGGTTTCAAGCGATGAATCTCCTAAAGAAGTCAAATTAGCAACCGATAACAACACCAAAGA
ACACGACAAAGAAAAAGAGC

Downstream 100 bases:

>100_bases
TTGAAAGAATTTGATTTAGAAAGCTATGATTATGATTTGCCTAAGGAATTGATCGCAAACTACCCCATTTTGCCCAAAGA
AAAGGCTAAATTACTCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MFEDLKPHLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKGTLIQLSPIEGVMVAVKISFSAAIVISMPIIFWQ
LWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVFPFIIEYLATFGSDVFAANISASSYVSFFTRLILGFGVAFE
LPVLAYFLAKVGLITDASLKAYFKYAIVVIFIVAAIITPPDVVSQIFMALPLVGLYGLSILIAKIVNPSPKDNENNNEEY
NENSAKENEKSES

Sequences:

>Translated_253_residues
MFEDLKPHLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKGTLIQLSPIEGVMVAVKISFSAAIVISMPIIFWQ
LWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVFPFIIEYLATFGSDVFAANISASSYVSFFTRLILGFGVAFE
LPVLAYFLAKVGLITDASLKAYFKYAIVVIFIVAAIITPPDVVSQIFMALPLVGLYGLSILIAKIVNPSPKDNENNNEEY
NENSAKENEKSES
>Mature_253_residues
MFEDLKPHLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKGTLIQLSPIEGVMVAVKISFSAAIVISMPIIFWQ
LWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVFPFIIEYLATFGSDVFAANISASSYVSFFTRLILGFGVAFE
LPVLAYFLAKVGLITDASLKAYFKYAIVVIFIVAAIITPPDVVSQIFMALPLVGLYGLSILIAKIVNPSPKDNENNNEEY
NENSAKENEKSES

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=260, Percent_Identity=34.2307692307692, Blast_Score=154, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 28260; Mature: 28260

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDLKPHLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKGTLIQLSPIEGVMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
AVKISFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVF
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHH
PFIIEYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLK
HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AYFKYAIVVIFIVAAIITPPDVVSQIFMALPLVGLYGLSILIAKIVNPSPKDNENNNEEY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NENSAKENEKSES
CCCCCCCCCCCCC
>Mature Secondary Structure
MFEDLKPHLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKGTLIQLSPIEGVMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
AVKISFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVF
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHH
PFIIEYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLK
HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AYFKYAIVVIFIVAAIITPPDVVSQIFMALPLVGLYGLSILIAKIVNPSPKDNENNNEEY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NENSAKENEKSES
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]