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The map label for this gene is copP [H]

Identifier: 188527185

GI number: 188527185

Start: 373835

End: 374038

Strand: Reverse

Name: copP [H]

Synonym: HPSH_01960

Alternate gene names: 188527185

Gene position: 374038-373835 (Counterclockwise)

Preceding gene: 188527186

Following gene: 188527180

Centisome position: 23.25

GC content: 42.65

Gene sequence:

>204_bases
ATGAAAGCAACTTTTCAAGTGCCAAGCATTACTTGCAACCATTGCGTGGATAAGATTGAAAAATTTGTGGGCGAAATTGA
AGGCGTGAGCTTTATTGATGTGAGCGTGGAAAAAAAGAGCGTGGTTGTAGAGTTTGACGCTCCAGCGACACAGGATTTGA
TTAAAGAAGCCTTATTAGATGCTGGGCAAGAAGTAGTGGGCTGA

Upstream 100 bases:

>100_bases
GTTAAGCCCGGCGATTGCGGGTTTAGCGATGAGTTTAAGCTCTGTGAGTGTGGTCTTAAACTCCCAAAGGCTAAGGAATT
TTAAAATTAAGGATCATTGA

Downstream 100 bases:

>100_bases
TTATCAAGGTGGTGTGATATAAAGATAGTTTTAAAGACCGCAACACTCAAAAGGGTTGTTGTCTTTTAATGCTTTGTTTG
GGTGTTTTTACGCCCTTCCA

Product: copper ion binding protein (copP)

Products: NA

Alternate protein names: Copper ion-binding protein [H]

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVVG

Sequences:

>Translated_67_residues
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVVG
>Mature_67_residues
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVVG

Specific function: Part of a cation-transporting system which is associated with copper export out of the H.pylori cells [H]

COG id: COG2608

COG function: function code P; Copper chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HMA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000428
- InterPro:   IPR006122
- InterPro:   IPR017969
- InterPro:   IPR006121 [H]

Pfam domain/function: PF00403 HMA [H]

EC number: NA

Molecular weight: Translated: 7253; Mature: 7253

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
AGQEVVG
CCHHHCC
>Mature Secondary Structure
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
AGQEVVG
CCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]