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The map label for this gene is ymdC [C]

Identifier: 188526995

GI number: 188526995

Start: 180473

End: 181981

Strand: Reverse

Name: ymdC [C]

Synonym: HPSH_00975

Alternate gene names: 188526995

Gene position: 181981-180473 (Counterclockwise)

Preceding gene: 188526996

Following gene: 188526993

Centisome position: 11.31

GC content: 38.44

Gene sequence:

>1509_bases
TTGAAAATCTTTTTAGTCCTTTTAAGCGTCTTTTTTTTTAATGGGTGCTTTGGGTTAGTCTATAAGACTCCCATTTCAAG
CCCCCCTATCTCTTATGATCCCTACACTACCACCATTGGGAGCTTGTATGCTGAAAAATTAAAAGAAAACCCTAACCATA
GCGCCGCCATTCTTTTAGAAGACGGCTTTGACGCCTTGTTGCATAGAGTGGGACTTATTAGAATGAGCCAAAAAAGCATT
GACATGCAAACTTATATTTATAAGAACGATCTTTCCTCTCAAGTGATCGCCAAAGAACTTTTAAATGCGGCCAATCGTGG
GGTAAAAGTGCGCATCCTTTTAGACGATAACGGAGTGTATTCGGATTTTTCAGATATTATGCTCTTAAATTTCCATAAAA
ACATTGAAGTGAAAATTTTTAACCCCTACTATATCCGCAATAAAGGCTTGCGTTATTTTGAAATGCTTGCGGATTATGAG
CGCATTAAAAAACGCATGCACAACAAGCTTTTCATCGTGGATAATTTCGCTGTCATTATAGGGGGGCGCAATATTGGGGA
TAATTATTTTGATAACGATTTAGACACGAATTTTTTAGATTTAGACGCTTTGTTTTTTGGGGGGGTTGCTTCAAAAGCCA
AAGAAAGCTTTGAACGCTATTGGAGATTCCACCGCTCTATCCCTGTTTCATTACTAAGAACCCATAAAAGACTCAAAAAC
AACGCTAAAGAAATCGCTAAACTCCATGAAAAAATCCCTATCAGCGCTGAAGACAAAAACCAGTTTGAAAAAAAAGTCAA
TGATTTTATAGAACGCTTCCAAAAATACCAATACCCTATTTATTATGGGAATGCCATTTTTTTAGCTGATTCACCCAAAA
AAATTGACACGCCCTTGTATTCGCCTATCAAAATCGCTTTTGAGAAAGCCCTTAAAAACGCTAAAGACTCCGTTTTTATC
GCTTCATCGTATTTTATTCCAGGCAAAAAGATGATGAAAATCTTTAAAAATCAAATTTCTAAGGGGATTGAATTGAATAT
TCTTACCAATTCCCTTTCATCTACTGATGCGATAGTGGTCTATGGGGCATGGGAAAGGTATCGCAACCAGTTAGTGCGAA
TGGGCGCGAATGTTTATGAAATACGAAACGATTTTTTCAACCGCCAGATTAAAGGGCGCTTTAGCACCAAACATTCCTTA
CACGGCAAGACGATTGTTTTTGATGACAATTTGACGCTTCTAGGGAGTTTCAATATTGATCCGCGCTCTGCATACATCAA
CACTGAAAGCGCGGTTTTGTTTGACAACCCGTCTTTTGCTAAAAGGGTGCGTTTGTCGCTTAAAGATCATGCCCAACAAT
CATGGCATTTGGTGGTGTATCGGCATAGGGTTATTTGGGAAGCGGTGGAAGAAGGGATTTTAATCCATGAAAAAACTTCG
CCTGACACTTCCTTCTTTTTACGCTTGATTAAAGAATGGTCTAAAGTCCTTCCTGAAAGAGAGCTTTAA

Upstream 100 bases:

>100_bases
CTGCCCTAAAGAATTACCCTTGCAAAGCAGTATCGCCACTTTGCGTAATAGGATGTTGAAAGTGGGTAAAAGCCGCTAAT
TTCTTTTTAGTGGGTCGTTT

Downstream 100 bases:

>100_bases
AATTTTTAATGCCCTTTATTATTTTGCGAAAAAGCGATATTATTGGTAACGGCGGCTAAAAGCGCTGAACACACAAACAC
CAAATGGATCACCACTTGCC

Product: conserved hypothetical secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKIFLVLLSVFFFNGCFGLVYKTPISSPPISYDPYTTTIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGVYSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIERFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI
ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
PDTSFFLRLIKEWSKVLPEREL

Sequences:

>Translated_502_residues
MKIFLVLLSVFFFNGCFGLVYKTPISSPPISYDPYTTTIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGVYSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIERFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI
ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
PDTSFFLRLIKEWSKVLPEREL
>Mature_502_residues
MKIFLVLLSVFFFNGCFGLVYKTPISSPPISYDPYTTTIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGVYSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIERFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI
ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
PDTSFFLRLIKEWSKVLPEREL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=469, Percent_Identity=31.7697228144989, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58316; Mature: 58316

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLVLLSVFFFNGCFGLVYKTPISSPPISYDPYTTTIGSLYAEKLKENPNHSAAILLE
CHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGVY
CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII
CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE
GGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
ECCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIERFQKYQYPIYYGNAIFLADSPKKIDTPLY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCCC
SPIKIAFEKALKNAKDSVFIASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVV
CHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE
YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHGKTIVFDDNLTLLGSFNID
EECHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEEECCEEEEEECCCC
PRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
CCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECCC
PDTSFFLRLIKEWSKVLPEREL
CCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIFLVLLSVFFFNGCFGLVYKTPISSPPISYDPYTTTIGSLYAEKLKENPNHSAAILLE
CHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGVY
CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII
CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE
GGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
ECCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIERFQKYQYPIYYGNAIFLADSPKKIDTPLY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCCC
SPIKIAFEKALKNAKDSVFIASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVV
CHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE
YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHGKTIVFDDNLTLLGSFNID
EECHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEEECCEEEEEECCCC
PRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
CCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECCC
PDTSFFLRLIKEWSKVLPEREL
CCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]