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The map label for this gene is yegQ [C]

Identifier: 188526973

GI number: 188526973

Start: 160286

End: 161566

Strand: Reverse

Name: yegQ [C]

Synonym: HPSH_00850

Alternate gene names: 188526973

Gene position: 161566-160286 (Counterclockwise)

Preceding gene: 188526974

Following gene: 188526972

Centisome position: 10.04

GC content: 42.0

Gene sequence:

>1281_bases
TTGAACCAAGTTGAATTACTCTCTCCAGCCGGTAATTTAAAAAAACTTAAAATCGCTCTCAACTATGGGGCTGATGCGGT
TTATGGGGGAGTGAGCCATTTTTCTTTACGCAATCGCGCAAGCAAGGAATTCACTTTAAAGACCTTTAAAGAAGGGATTG
ACTACGCCCATGCACTAAATAAAAAAGTCTATGCCACGATCAATGGTTTCCCTTTCAATTCACAGCTCAAACTTTTAGAA
GAACATATTTATAAAATGGCAGAATTGAAGCCAGACGCTTTTATTATCGCTGCGCCTGGGGTAATCAAACTCGCTTTAAA
AATCGCCCCGCATATCCCTATCCATTTATCCACGCAAGCGAATGTCTTGAATTTGCTGGATGCGCAAGTGTTTTATGATT
TAGGGGTTAAACGCATTGTGTGCGCTAGGGAATTGAGCCTGAATGATGCGATTGAGATTAAAAAAGCCTTACCCGATTTA
GAATTAGAAATCTTTGTGCATGGGAGCATGTGCTTTGCCTTTTCAGGGCGTTGCTTGATTTCGGCCTTACAAAAGGGGCG
CGTGCCTAATAGAGGGAGTTGCGCGAATGATTGCCGGTTTGATTATGAATATTATGTGAAAAATCCGGATAACGGCGTGA
TGATGAGGTTGGTTGAAGAAGAGGGCGTAGGCACGCATATTTTTAACGCTAAAGATTTGAATCTCTCTAATCATATCGCT
GAAATTTTAAGTTCAAACGCCATTAGTGCGCTTAAGATTGAAGGGCGCACCAAGTCCAGTTATTACGCCGCGCAAACCAC
GCGCATCTATCGTTTAGCGGTTGATGATTTTTACCATAACACCTTAAAGCCGAGTTTTTATGCTAGCGAGTTGAACACGC
TTAAAAACAGAGGCTTCACCGACGGCTATTTGATGCGTAGGCCTTTTGAAAGATTGGATACTCAAAACCACCAAACAGCC
ATTAGCGAAGGGGATTTTCAAGTCAATGGCGAAATAACAGAAGACGGGCGTTTTTTTGCATGCAAATTCACCACGACCAC
TAACACCGCTTATGAAATCATCGCTCCCAAAAATGCGGCTATCACGCCCATAGTCAATGAAATTGGCAAGATTTATACCT
TTGAAAAACGCTCTTATTTAGTGCTGTATAAAATCCTTTTAGAAAATAACACCGAGTTAGAAACTATCCATAGCGGGAAT
GTGAATTTAGTGCGACTGCCCGCACCCTTACCGGCTTTTAGTTTTTTACGCACCCAAGTAGAGCCTAAAAATGGCGTTTA
G

Upstream 100 bases:

>100_bases
GCGTGAGTTCAGCGACTTATATCACCGGCGATGACGATAAAGATTTAGCCAGCGCGGATGATATTGAAGCTTTGATCGCT
TCTTTTGGAGCCAAGTAGTT

Downstream 100 bases:

>100_bases
AGATTAGGTATTAAAACGATTAAGAAGAACGCATGCCCTTAGAAACGATCACGCTCGCTAATATTTATGAAGAACAAGGG
TTTTTTGAAGAAGCGTTGCA

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLKTFKEGIDYAHALNKKVYATINGFPFNSQLKLLE
EHIYKMAELKPDAFIIAAPGVIKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDL
ELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTA
ISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGN
VNLVRLPAPLPAFSFLRTQVEPKNGV

Sequences:

>Translated_426_residues
MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLKTFKEGIDYAHALNKKVYATINGFPFNSQLKLLE
EHIYKMAELKPDAFIIAAPGVIKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDL
ELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTA
ISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGN
VNLVRLPAPLPAFSFLRTQVEPKNGV
>Mature_426_residues
MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLKTFKEGIDYAHALNKKVYATINGFPFNSQLKLLE
EHIYKMAELKPDAFIIAAPGVIKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDL
ELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTA
ISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGN
VNLVRLPAPLPAFSFLRTQVEPKNGV

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=400, Percent_Identity=36.75, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI87081910, Length=274, Percent_Identity=33.5766423357664, Blast_Score=145, Evalue=7e-36,
Organism=Escherichia coli, GI1789548, Length=299, Percent_Identity=30.7692307692308, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47793; Mature: 47793

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLKTFKEGIDYAHALN
CCCEEEECCCCCCEEEEEEEECCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
KKVYATINGFPFNSQLKLLEEHIYKMAELKPDAFIIAAPGVIKLALKIAPHIPIHLSTQA
CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEECCCC
NVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDLELEIFVHGSMCFAFSGRCLI
HHHHHHHHHHHHHCCHHHEEHHHHCCCCHHHHHHHHCCCCEEEEEEECCEEEEECCHHHH
SALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
HHHHHCCCCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHH
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFT
HHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCC
DGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAA
CCHHHCCCHHHHCCCCCCEEECCCCEEECCEEECCCCEEEEEEEECCCCEEEEEECCCCC
ITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQV
CCHHHHHCCCEEEECCCCEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHCC
EPKNGV
CCCCCC
>Mature Secondary Structure
MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLKTFKEGIDYAHALN
CCCEEEECCCCCCEEEEEEEECCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
KKVYATINGFPFNSQLKLLEEHIYKMAELKPDAFIIAAPGVIKLALKIAPHIPIHLSTQA
CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEECCCC
NVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDLELEIFVHGSMCFAFSGRCLI
HHHHHHHHHHHHHCCHHHEEHHHHCCCCHHHHHHHHCCCCEEEEEEECCEEEEECCHHHH
SALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
HHHHHCCCCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHH
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFT
HHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCC
DGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAA
CCHHHCCCHHHHCCCCCCEEECCCCEEECCEEECCCCEEEEEEEECCCCEEEEEECCCCC
ITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQV
CCHHHHHCCCEEEECCCCEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHCC
EPKNGV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]