Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526972

Identifier: 188526972

GI number: 188526972

Start: 159990

End: 160253

Strand: Reverse

Name: 188526972

Synonym: HPSH_00845

Alternate gene names: NA

Gene position: 160253-159990 (Counterclockwise)

Preceding gene: 188526973

Following gene: 188526971

Centisome position: 9.96

GC content: 34.85

Gene sequence:

>264_bases
ATGCCCTTAGAAACGATCACGCTCGCTAATATTTATGAAGAACAAGGGTTTTTTGAAGAAGCGTTGCAAATTTATACTAA
TATTTTAAAAAAAACCCCTGACCATACAGAGGCGTTAAAACAAATAAAGCGTTTGGAAAAAATCCAAAAAAATCTCGCTC
CTTTCAAACACGATGCAACACTAGAGCGGCACTATTTAAATTTTATCAAAGGGGATTGTTTGAGCGTTGAGAATTTAGAA
AAATGGCTGGTAGAATGGAATTGA

Upstream 100 bases:

>100_bases
GACTGCCCGCACCCTTACCGGCTTTTAGTTTTTTACGCACCCAAGTAGAGCCTAAAAATGGCGTTTAGAGATTAGGTATT
AAAACGATTAAGAAGAACGC

Downstream 100 bases:

>100_bases
AAAACATTATTTCAGAAACCCTTAATGAAATTGAAAAAATGGCTAAAACCATTGATGATGGTTTTGATACGGTGCAAAAA
ACGCCCTCTTTTTTCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MPLETITLANIYEEQGFFEEALQIYTNILKKTPDHTEALKQIKRLEKIQKNLAPFKHDATLERHYLNFIKGDCLSVENLE
KWLVEWN

Sequences:

>Translated_87_residues
MPLETITLANIYEEQGFFEEALQIYTNILKKTPDHTEALKQIKRLEKIQKNLAPFKHDATLERHYLNFIKGDCLSVENLE
KWLVEWN
>Mature_86_residues
PLETITLANIYEEQGFFEEALQIYTNILKKTPDHTEALKQIKRLEKIQKNLAPFKHDATLERHYLNFIKGDCLSVENLEK
WLVEWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10346; Mature: 10215

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLETITLANIYEEQGFFEEALQIYTNILKKTPDHTEALKQIKRLEKIQKNLAPFKHDAT
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
LERHYLNFIKGDCLSVENLEKWLVEWN
HHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PLETITLANIYEEQGFFEEALQIYTNILKKTPDHTEALKQIKRLEKIQKNLAPFKHDAT
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
LERHYLNFIKGDCLSVENLEKWLVEWN
HHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA