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The map label for this gene is 188526930

Identifier: 188526930

GI number: 188526930

Start: 123466

End: 124326

Strand: Direct

Name: 188526930

Synonym: HPSH_00635

Alternate gene names: NA

Gene position: 123466-124326 (Clockwise)

Preceding gene: 188526929

Following gene: 188526931

Centisome position: 7.68

GC content: 41.81

Gene sequence:

>861_bases
ATGAAGAAATCTGTTATAGTAGGTGCTATCTCTCTCGCAATGACGAGCTTATTGTCAGCAGAGACCCCTAAGCAAGAAAA
AGCTATTAAGACTAGCCCTACCAAAAAAGGTGAAAGAAATGCTGCTTTTATAGGGATTGATTACCAGTTGGGTATGCTTA
GCACTACCGCTCAAAATTGTTCCCATGGGAATTGTAATGGTAATCAAAGTGGGGCTTACGGCTCTAATACGCCCAACATG
CCTACAGCGTCAAACCCAACAGGAGGGCTTACTCATGGTGCTCTAGGGACTCGTGGGTATAAAGGCTTAAGCAACCAACA
ATACGCTATCAATGGTTTTGGGTTTGTTGTAGGGTATAAGCATTTTTTTAAGAAATCCCCGCAATTTGGAATGCGTTATT
ACGGATTCTTTGATTTTGCAAGCTCTTATTATAAGTATTACACTTATAATGATTATGGCATGAGAGACGCTCGCAAGGGT
TCTCAAAGTTTCATGTTTGGCTATGGGGCTGGCACAGATGTGTTGTTTAACCCGGCCATTTTCAATCGTGAGAACTTGCA
TTTTGGGTTTTTCGTTGGCGTTGCGATTGGTGGCACTTCTTGGGGTCCAACAAACTATTATTTTAAGGACTTAGCTGATG
AATACAGAGGGAGTTTCCACCCATCAAATTTCCAGGTCTTAGTGAATGGCGGGATCCGATTAGGCACTAAACACCAAGGT
TTTGAAATTGGCTTGAAAATCCAAACCATTCGCAACAATTATTATACCGCTAGTGCGGATAATGTTCCTGAAGGGACTAC
TTATAGATTCACCTTCCACCGCCCTTACGCCTTTTATTGGCGTTACATTGTAAGCTTTTAA

Upstream 100 bases:

>100_bases
AATCGCTATAAATCGCTATATTTAATCAAAAAGAAAGCAATTTTATAGTAGAATGTAGCATTTAGAACTCAAGTAGAGAA
AATGTAGAAGGAAGGAATAC

Downstream 100 bases:

>100_bases
GGTGTTTTAGGGTTAATCTTATGGGGGCATAGAAAAGGGCTTTTGCTCTTTATGGCCTTTTATTTTCTTGTATCAAAGGC
TCTAAAAAATCAATACAGCC

Product: outer membrane protein HorB

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein HorI; Outer Membrane Protein,HopV BabB BabA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKG
SQSFMFGYGAGTDVLFNPAIFNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF

Sequences:

>Translated_286_residues
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKG
SQSFMFGYGAGTDVLFNPAIFNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
>Mature_286_residues
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKG
SQSFMFGYGAGTDVLFNPAIFNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31843; Mature: 31843

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNC
CCCCEEEHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHCCC
SHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEHH
HFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDVLFNPAI
HHHCCCCCCCCEEEEHHHHHHCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEECCEE
FNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
ECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCC
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
EEEEEEEEEEECCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNC
CCCCEEEHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHCCC
SHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEHH
HFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDVLFNPAI
HHHCCCCCCCCEEEEHHHHHHCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEECCEE
FNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
ECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCC
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
EEEEEEEEEEECCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA