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The map label for this gene is rpmI

Identifier: 188526928

GI number: 188526928

Start: 122616

End: 122810

Strand: Direct

Name: rpmI

Synonym: HPSH_00625

Alternate gene names: 188526928

Gene position: 122616-122810 (Clockwise)

Preceding gene: 188526927

Following gene: 188526929

Centisome position: 7.62

GC content: 41.03

Gene sequence:

>195_bases
ATGCCAAAAATGAAGACTAATCGCGGCGCGTCTAAGCGTTTCAAAGTTAAAAAAAACTTGATTAAGCGTGGCAGCGCTTT
TAAAAGCCATATTTTGACTAAAAAAAGCCCTAAGCGTAAAGCCAATTTAAACGCGCCAAAACATGTGCATCACACTAACG
CGCATTCTGTCATGTCGTTGCTTTGCAGGGCTTAA

Upstream 100 bases:

>100_bases
ATGTTTGTGCCTAAGGCTAAAGAAGCCCCCAAGAACGAAAAGAAAACCAAGGAAAATAACCCGCCTTTTAATCGTATTAA
CCTTATGAAAGGAGAAAATC

Downstream 100 bases:

>100_bases
GAATGCTAATTAGAAGTGGAGTTAATCCCCTTATTTAAGGGAAAGTCGTTTAAAAAAACGCACCTAAAAATATTTTAAAA
AGAAAGGTAAAGAAATGAGA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA

Sequences:

>Translated_64_residues
MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA
>Mature_63_residues
PKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_HELP2 (B6JPM4)

Other databases:

- EMBL:   CP001217
- RefSeq:   YP_002300765.1
- ProteinModelPortal:   B6JPM4
- SMR:   B6JPM4
- GeneID:   7010495
- GenomeReviews:   CP001217_GR
- KEGG:   hpp:HPP12_0125
- HOGENOM:   HBG734125
- OMA:   HETELAH
- ProtClustDB:   PRK00172
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7260; Mature: 7129

Theoretical pI: Translated: 12.73; Mature: 12.73

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSL
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LCRA
HHCC
>Mature Secondary Structure 
PKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSL
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LCRA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA