| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526867
Identifier: 188526867
GI number: 188526867
Start: 55564
End: 55647
Strand: Direct
Name: 188526867
Synonym: HPSH_00285
Alternate gene names: NA
Gene position: 55564-55647 (Clockwise)
Preceding gene: 188526866
Following gene: 188526869
Centisome position: 3.45
GC content: 35.71
Gene sequence:
>84_bases ATGAGTGGTGCTCATAGTGTAGAAAATACGAATACAGAAAAAATACGAATATTTCAAATACGACTGCTTCCACCCCCTCA ATAA
Upstream 100 bases:
>100_bases GAGGGGGCAAAAAGGGGGGGATATAAAGCTCATTTTAAGTTTTCTCAAATTACAATAACAATCTTTTTAACATTGATATG AGATAAAAGGAGATATTCTT
Downstream 100 bases:
>100_bases TGAAGAATCTTTAATAATGAAGGGCTTTTAAAATCTCTTAAAGATCTAATAGATCGCTTTAAAAAATTAGAAGACAAATT AGAAGACCTTGAACCCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 27; Mature: 26
Protein sequence:
>27_residues MSGAHSVENTNTEKIRIFQIRLLPPPQ
Sequences:
>Translated_27_residues MSGAHSVENTNTEKIRIFQIRLLPPPQ >Mature_26_residues SGAHSVENTNTEKIRIFQIRLLPPPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3078; Mature: 2946
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAHSVENTNTEKIRIFQIRLLPPPQ CCCCCCCCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure SGAHSVENTNTEKIRIFQIRLLPPPQ CCCCCCCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA