Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526867

Identifier: 188526867

GI number: 188526867

Start: 55564

End: 55647

Strand: Direct

Name: 188526867

Synonym: HPSH_00285

Alternate gene names: NA

Gene position: 55564-55647 (Clockwise)

Preceding gene: 188526866

Following gene: 188526869

Centisome position: 3.45

GC content: 35.71

Gene sequence:

>84_bases
ATGAGTGGTGCTCATAGTGTAGAAAATACGAATACAGAAAAAATACGAATATTTCAAATACGACTGCTTCCACCCCCTCA
ATAA

Upstream 100 bases:

>100_bases
GAGGGGGCAAAAAGGGGGGGATATAAAGCTCATTTTAAGTTTTCTCAAATTACAATAACAATCTTTTTAACATTGATATG
AGATAAAAGGAGATATTCTT

Downstream 100 bases:

>100_bases
TGAAGAATCTTTAATAATGAAGGGCTTTTAAAATCTCTTAAAGATCTAATAGATCGCTTTAAAAAATTAGAAGACAAATT
AGAAGACCTTGAACCCCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 27; Mature: 26

Protein sequence:

>27_residues
MSGAHSVENTNTEKIRIFQIRLLPPPQ

Sequences:

>Translated_27_residues
MSGAHSVENTNTEKIRIFQIRLLPPPQ
>Mature_26_residues
SGAHSVENTNTEKIRIFQIRLLPPPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3078; Mature: 2946

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAHSVENTNTEKIRIFQIRLLPPPQ
CCCCCCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
SGAHSVENTNTEKIRIFQIRLLPPPQ
CCCCCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA