| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187930666
Identifier: 187930666
GI number: 187930666
Start: 3773704
End: 3774753
Strand: Reverse
Name: 187930666
Synonym: Rpic_3602
Alternate gene names: NA
Gene position: 3774753-3773704 (Counterclockwise)
Preceding gene: 187930669
Following gene: 187930664
Centisome position: 95.74
GC content: 66.1
Gene sequence:
>1050_bases ATGGGTGTTTTTACCTGCACGACCGCCCGCGCACACGGCGTCCGGGGCTGGATCACGCCGTGGCTCGCTGCCCTTCTGGC AGTGGCAACTTCGCATGCTCTCGCACAAGACCCGACGCGCCTGACGCTCATGGTCAGCGGCACCGCCAAGATGATCTACC TGCCGGCCACGCTGGCGCAACGTCTGGGCTATTTCCGCGACGAAGGGCTCGAAGTGGAACTGCTCTCGCAGCCCGCCGGC GTTGATGCGGAGAGCGAACTGCTCACCGGCTTTGCGCAAGGCGTGGTCGGCTTCTATGACCACACCATCGACCTCCAGGC CAAGGGCAAGGAAGTGCGCGCCATTGTCGTATTCAGCCAGGTGCCGGGCGAAGCGGAAGTCGTGTCGACACGCTTGCCGG CGACGGTGCAGTCGATGCGTGACTTGCGCGGCCGCACGCTGGGCGTGACGGGGCTGGGTGCATCCACGAGCTTTCTCACG CGCTACCTGATGGTGCAGCAGGGGCTCTCGGCCGGCGACTACACCATGCTGCCGGTTGGCGCGGAACACAGTTTCGTCAC TGCGCTGCGCAACGGCCGCATCGATGCAGGCATGACCACCGACCCGACGGTCTCGCGCCTCGTGCACAGCGGCGAGGCCC GCGTGCTGCTCGACTTGCGCACGCTCGAGAGCACACGAGCGGCGCTCGGCGGTTCGTACCCGGCCGCGTGCCTGTACCTG CAGACCGCATGGCTGGAAGCACATCCGGACATCGCTACCAAACTGGCCCACGCATTCGTGCGCACCCTGCATTACATGCA CACGCACGGTGCAGAAGACATTGCCGCCCGCATGCCGCCTGAATTCCGGCGCGATCATCCCGAGCTGTACACAAAAGCGC TTGCCGCCGCGTTGCCCACCTTCAGCACCGACGGACGCATGCCGGACGACGGCCCACCCACCGTCCTGCGCGTCCTCGCC GCCAGCAATGCCAACGCGCGCGACAAGCACATCGACCTCTCGCGCACCTACACCAACAGGTTTGTCGATCAGGTGCGCGA GCGCCGCTAG
Upstream 100 bases:
>100_bases TTCCTAGAATGGTGGCGGCTGCCTACGCGCGCCGGAGGCATCACTCACCAGATCCGGACCGCGCGATACCGATATCTACA AAAGAGCCGGAGACAACTCA
Downstream 100 bases:
>100_bases CTCAAGCCAAACAGGCGCTTAGAAGCGCGTGCGCATACCGACGGCGAACTCCGTCTGGCTGTTGTGGCCGTTGGTGCCGC CCACGATGTACTGATCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Signal Peptide Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; ABC Transporter Protein
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MGVFTCTTARAHGVRGWITPWLAALLAVATSHALAQDPTRLTLMVSGTAKMIYLPATLAQRLGYFRDEGLEVELLSQPAG VDAESELLTGFAQGVVGFYDHTIDLQAKGKEVRAIVVFSQVPGEAEVVSTRLPATVQSMRDLRGRTLGVTGLGASTSFLT RYLMVQQGLSAGDYTMLPVGAEHSFVTALRNGRIDAGMTTDPTVSRLVHSGEARVLLDLRTLESTRAALGGSYPAACLYL QTAWLEAHPDIATKLAHAFVRTLHYMHTHGAEDIAARMPPEFRRDHPELYTKALAAALPTFSTDGRMPDDGPPTVLRVLA ASNANARDKHIDLSRTYTNRFVDQVRERR
Sequences:
>Translated_349_residues MGVFTCTTARAHGVRGWITPWLAALLAVATSHALAQDPTRLTLMVSGTAKMIYLPATLAQRLGYFRDEGLEVELLSQPAG VDAESELLTGFAQGVVGFYDHTIDLQAKGKEVRAIVVFSQVPGEAEVVSTRLPATVQSMRDLRGRTLGVTGLGASTSFLT RYLMVQQGLSAGDYTMLPVGAEHSFVTALRNGRIDAGMTTDPTVSRLVHSGEARVLLDLRTLESTRAALGGSYPAACLYL QTAWLEAHPDIATKLAHAFVRTLHYMHTHGAEDIAARMPPEFRRDHPELYTKALAAALPTFSTDGRMPDDGPPTVLRVLA ASNANARDKHIDLSRTYTNRFVDQVRERR >Mature_348_residues GVFTCTTARAHGVRGWITPWLAALLAVATSHALAQDPTRLTLMVSGTAKMIYLPATLAQRLGYFRDEGLEVELLSQPAGV DAESELLTGFAQGVVGFYDHTIDLQAKGKEVRAIVVFSQVPGEAEVVSTRLPATVQSMRDLRGRTLGVTGLGASTSFLTR YLMVQQGLSAGDYTMLPVGAEHSFVTALRNGRIDAGMTTDPTVSRLVHSGEARVLLDLRTLESTRAALGGSYPAACLYLQ TAWLEAHPDIATKLAHAFVRTLHYMHTHGAEDIAARMPPEFRRDHPELYTKALAAALPTFSTDGRMPDDGPPTVLRVLAA SNANARDKHIDLSRTYTNRFVDQVRERR
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37954; Mature: 37823
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVFTCTTARAHGVRGWITPWLAALLAVATSHALAQDPTRLTLMVSGTAKMIYLPATLAQ CCEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECHHHHH RLGYFRDEGLEVELLSQPAGVDAESELLTGFAQGVVGFYDHTIDLQAKGKEVRAIVVFSQ HCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEEEC VPGEAEVVSTRLPATVQSMRDLRGRTLGVTGLGASTSFLTRYLMVQQGLSAGDYTMLPVG CCCCHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEC AEHSFVTALRNGRIDAGMTTDPTVSRLVHSGEARVLLDLRTLESTRAALGGSYPAACLYL CCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHH QTAWLEAHPDIATKLAHAFVRTLHYMHTHGAEDIAARMPPEFRRDHPELYTKALAAALPT HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCC FSTDGRMPDDGPPTVLRVLAASNANARDKHIDLSRTYTNRFVDQVRERR CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVFTCTTARAHGVRGWITPWLAALLAVATSHALAQDPTRLTLMVSGTAKMIYLPATLAQ CEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECHHHHH RLGYFRDEGLEVELLSQPAGVDAESELLTGFAQGVVGFYDHTIDLQAKGKEVRAIVVFSQ HCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEEEC VPGEAEVVSTRLPATVQSMRDLRGRTLGVTGLGASTSFLTRYLMVQQGLSAGDYTMLPVG CCCCHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEC AEHSFVTALRNGRIDAGMTTDPTVSRLVHSGEARVLLDLRTLESTRAALGGSYPAACLYL CCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHH QTAWLEAHPDIATKLAHAFVRTLHYMHTHGAEDIAARMPPEFRRDHPELYTKALAAALPT HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCC FSTDGRMPDDGPPTVLRVLAASNANARDKHIDLSRTYTNRFVDQVRERR CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA