Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 187930585

GI number: 187930585

Start: 3690868

End: 3691779

Strand: Reverse

Name: parB [H]

Synonym: Rpic_3520

Alternate gene names: 187930585

Gene position: 3691779-3690868 (Counterclockwise)

Preceding gene: 187930586

Following gene: 187930584

Centisome position: 93.64

GC content: 64.36

Gene sequence:

>912_bases
ATGAGCACGATGAAAAAAAAGGGACTGGGCCGCGGCCTCGAAGCGCTGCTCGGCAGTCCAGCCGAGATTGTCGAAGCCGC
CAAGCAGGAGGGCGCCCCGACGGTCCTGAAGCTGGAACAGATGCAGCCCGGCAAATATCAGCCGCGCACGCGCATGGACG
AAGGCGCGCTGCAGGAGCTCGCCGCCAGCATCCGCGCACAAGGCCTGATGCAGCCGATTCTGGTGCGCAAGGTCGAGTCA
GACGGCGCGAAGCCGAAGTACGAAATCATCGCGGGTGAACGCCGCTTCCGCGCTTCGCGCCTCGCCGGCCTGACCGAAGT
GCCCGTCCTCGTGAAGGACGTGCCGGATGAATCAGCCGCTGCCATGGCGCTGATCGAGAACATCCAGCGCGAAGATCTCA
ACCCGCTGGAAGAGGCGCAGGGCATTGCGCGCCTGGTGCGTGAATTCCAGTTCACGCACGAGCAGGCGGCGGAATCGGTA
GGGCGTTCGCGCAGCGCGGTGTCGAACCTGTTGCGCCTGCTCAATCTCGCTCAGCCCGTGCAGACCATGCTGATGGCCGG
CGACCTCGACATGGGCCACGCCCGCGCGCTGCTCGCCGTCGATGGCGCTACGCAGATCACATTGGCCAACCAGATCGTCA
ACAAGCGCCTGTCGGTGCGCGAGACGGAAAAACTGGTCGCGTTGACGCTCAAGCCATTCGAGCTGAAGTCACTCAAGCAA
AAGGGCGGTCACCAAGGTGGTCGTGACGTCGCGCGCCTGGAAGAGGAGTTGGCCGATCAACTGGGCCTGGGTGTGCAGAT
CAAGCTGGCGGCCAAGGGCCGTGGTCAGTTGACCGTGCAGTTCAGCAGTCTTGACGAGTTCGACGGCTTGCTCGCGCGCC
TGCGACCGGACGGCAACGAAGAGGCGGCCTGA

Upstream 100 bases:

>100_bases
CATCGAAGGGGGCCAAGGCCTATCTGGATTTCGGTGCCGAGATGATCGCGCGCGTGCGGCAGATGGCCGACACGCCGGCC
TGAGCGGTAAGAGGAACAAC

Downstream 100 bases:

>100_bases
GTTTCCCTGCGACAGTTTGACGCACGTATTGGAGCCGTCGTCGTGGCGCCGTGTACGGGCACCCTTTGGCACGGAATTGG
TGCAATTACCTCGCGCGTCA

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSTMKKKGLGRGLEALLGSPAEIVEAAKQEGAPTVLKLEQMQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRKVES
DGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDVPDESAAAMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESV
GRSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVALTLKPFELKSLKQ
KGGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARLRPDGNEEAA

Sequences:

>Translated_303_residues
MSTMKKKGLGRGLEALLGSPAEIVEAAKQEGAPTVLKLEQMQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRKVES
DGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDVPDESAAAMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESV
GRSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVALTLKPFELKSLKQ
KGGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARLRPDGNEEAA
>Mature_302_residues
STMKKKGLGRGLEALLGSPAEIVEAAKQEGAPTVLKLEQMQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRKVESD
GAKPKYEIIAGERRFRASRLAGLTEVPVLVKDVPDESAAAMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESVG
RSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVALTLKPFELKSLKQK
GGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARLRPDGNEEAA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32924; Mature: 32793

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMKKKGLGRGLEALLGSPAEIVEAAKQEGAPTVLKLEQMQPGKYQPRTRMDEGALQEL
CCCHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AASIRAQGLMQPILVRKVESDGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDVPDESAA
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCHHCCHHHHCCCCHHHH
AMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESVGRSRSAVSNLLRLLNLAQPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVALTLKPFELKSLKQ
HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH
KGGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARLRPDGNE
HCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCC
EAA
CCC
>Mature Secondary Structure 
STMKKKGLGRGLEALLGSPAEIVEAAKQEGAPTVLKLEQMQPGKYQPRTRMDEGALQEL
CCHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AASIRAQGLMQPILVRKVESDGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDVPDESAA
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCHHCCHHHHCCCCHHHH
AMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESVGRSRSAVSNLLRLLNLAQPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVALTLKPFELKSLKQ
HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH
KGGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARLRPDGNE
HCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCC
EAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]