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The map label for this gene is yccU [H]

Identifier: 187930573

GI number: 187930573

Start: 3678144

End: 3678608

Strand: Reverse

Name: yccU [H]

Synonym: Rpic_3508

Alternate gene names: 187930573

Gene position: 3678608-3678144 (Counterclockwise)

Preceding gene: 187930574

Following gene: 187930572

Centisome position: 93.31

GC content: 66.67

Gene sequence:

>465_bases
ATGTTGTCCGCCAATCCCTCCTACGCTGACGAGCAAGCCACCATGCGCCGGCTGCTGTCCGGCAAGACCATCGCCGTGGT
CGGGCTGTCGCCGCGTCCCACGCGGCCCAGCTATGACGTGGCGCGCTATCTGCAGCAGGCCGGCTATCGCATCGTGCCCG
TCAATCCGCAGCACGCGGGCGAAGACGTGCTCGGCGAGCCCTGCTACGCCACGCTCACCGAAGCTGCGACGACGCTTGCC
GCCGCCGGCCAGCGCATCGATCTGGTCGATATCTTCCGGCGCTCAGAGCAGGTGCTGCCCGTCGTGCAGGAAGCCGTGAT
GCTGGGCGTGGGCGGCATCTGGGTGCAGCTCGGCATCGTGAATGACGAGGCGATGGCCGTGGCGCGCAACGCTGGCATTC
CGGCCGTGCAAGACCGCTGCACGAAGATCGAACACTGGCGACTCGGCATCGGCGAGCAAAAATAA

Upstream 100 bases:

>100_bases
GACCCTATTCGTCGGGCGCGTTCCGTGCTGCCGTGCGCATCGATGACCTGGGCGCCGCATGCAAGCGGCCCGCAACCTGA
TTCCATCTGCATCGTCAACC

Downstream 100 bases:

>100_bases
ATGTCAGCCCCCAAGGCGCCCTGTGCGACGAACGCGACGGCGCCCCGGACTGACATTCCGCTGCCGCTCGCGCCGTGCGG
CTTCCTGACGTATCGGAAGG

Product: CoA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLSANPSYADEQATMRRLLSGKTIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAGEDVLGEPCYATLTEAATTLA
AAGQRIDLVDIFRRSEQVLPVVQEAVMLGVGGIWVQLGIVNDEAMAVARNAGIPAVQDRCTKIEHWRLGIGEQK

Sequences:

>Translated_154_residues
MLSANPSYADEQATMRRLLSGKTIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAGEDVLGEPCYATLTEAATTLA
AAGQRIDLVDIFRRSEQVLPVVQEAVMLGVGGIWVQLGIVNDEAMAVARNAGIPAVQDRCTKIEHWRLGIGEQK
>Mature_154_residues
MLSANPSYADEQATMRRLLSGKTIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAGEDVLGEPCYATLTEAATTLA
AAGQRIDLVDIFRRSEQVLPVVQEAVMLGVGGIWVQLGIVNDEAMAVARNAGIPAVQDRCTKIEHWRLGIGEQK

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=135, Percent_Identity=43.7037037037037, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 16696; Mature: 16696

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSANPSYADEQATMRRLLSGKTIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAG
CCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCC
EDVLGEPCYATLTEAATTLAAAGQRIDLVDIFRRSEQVLPVVQEAVMLGVGGIWVQLGIV
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEE
NDEAMAVARNAGIPAVQDRCTKIEHWRLGIGEQK
CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSANPSYADEQATMRRLLSGKTIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAG
CCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCC
EDVLGEPCYATLTEAATTLAAAGQRIDLVDIFRRSEQVLPVVQEAVMLGVGGIWVQLGIV
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEE
NDEAMAVARNAGIPAVQDRCTKIEHWRLGIGEQK
CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]