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The map label for this gene is 187930526

Identifier: 187930526

GI number: 187930526

Start: 3620331

End: 3620687

Strand: Reverse

Name: 187930526

Synonym: Rpic_3461

Alternate gene names: NA

Gene position: 3620687-3620331 (Counterclockwise)

Preceding gene: 187930527

Following gene: 187930525

Centisome position: 91.84

GC content: 71.43

Gene sequence:

>357_bases
ATGCCCGTCGTCCACCGCCCTGCCGCCGCAGCACTGCTTGCGGCGCTGCTTACGGCCCCTGCGCCCGATGTGGCCCATGC
GGCCGATCATCCCCCCACCAATCTGCAGGCCCGCACCTGGGCTGCCACGTGCGCCAGCTGCCATCACGCCGATACCGCCC
CTGGCGCCAAGCTCCCCGCGCAGACGTTGCCGCCGCTGACCGGTCGCTCGCAGGCCGAGCTGATCGACACCATGCAAGCC
TTTCGCAGCGGCGCGCGCCCCTCCACGGTGATGGGCCAGATCGCCCGCGGTTATGACGATGCGCAGATCGCCGCCATTGC
CGGCTGGCTGTCGCGCCAACCGCAGGAGGCGCCATGA

Upstream 100 bases:

>100_bases
GGCACCGCGCTGCGTTTTTTGTTGGCTGCACGCATCACAGGGCGCATGGCCGGCCGTGCGTGTTAGCGTATGACGCTCCC
GCGACTTCGCAGCCCCCCCG

Downstream 100 bases:

>100_bases
GCGAACGGCTGCGCAAGGATCGACGCGCACTCCTGCGTGCGCTCGGGGCAACTGCGCTTGCCGGGCCGCTGGCCGCATGC
GCTTCGCTGTCGGGTGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Soxe Homolog; Signal Peptide Protein; Cytochrome C

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPVVHRPAAAALLAALLTAPAPDVAHAADHPPTNLQARTWAATCASCHHADTAPGAKLPAQTLPPLTGRSQAELIDTMQA
FRSGARPSTVMGQIARGYDDAQIAAIAGWLSRQPQEAP

Sequences:

>Translated_118_residues
MPVVHRPAAAALLAALLTAPAPDVAHAADHPPTNLQARTWAATCASCHHADTAPGAKLPAQTLPPLTGRSQAELIDTMQA
FRSGARPSTVMGQIARGYDDAQIAAIAGWLSRQPQEAP
>Mature_117_residues
PVVHRPAAAALLAALLTAPAPDVAHAADHPPTNLQARTWAATCASCHHADTAPGAKLPAQTLPPLTGRSQAELIDTMQAF
RSGARPSTVMGQIARGYDDAQIAAIAGWLSRQPQEAP

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12217; Mature: 12086

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVHRPAAAALLAALLTAPAPDVAHAADHPPTNLQARTWAATCASCHHADTAPGAKLPA
CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH
QTLPPLTGRSQAELIDTMQAFRSGARPSTVMGQIARGYDDAQIAAIAGWLSRQPQEAP
HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PVVHRPAAAALLAALLTAPAPDVAHAADHPPTNLQARTWAATCASCHHADTAPGAKLPA
CCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH
QTLPPLTGRSQAELIDTMQAFRSGARPSTVMGQIARGYDDAQIAAIAGWLSRQPQEAP
HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA