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The map label for this gene is fccB [H]

Identifier: 187930525

GI number: 187930525

Start: 3619042

End: 3620334

Strand: Reverse

Name: fccB [H]

Synonym: Rpic_3460

Alternate gene names: 187930525

Gene position: 3620334-3619042 (Counterclockwise)

Preceding gene: 187930526

Following gene: 187930524

Centisome position: 91.83

GC content: 68.6

Gene sequence:

>1293_bases
ATGAGCGAACGGCTGCGCAAGGATCGACGCGCACTCCTGCGTGCGCTCGGGGCAACTGCGCTTGCCGGGCCGCTGGCCGC
ATGCGCTTCGCTGTCGGGTGTGCGCAATGCGCGCGTTGTAGTGGTTGGCGGCGGCTACGGCGGCGCGACGGCTGCCAAGT
ATGTGCGCGTGTTTTCCGGCGGCCATGTCGACGTGACGCTGGTCGAGCCGAACGCCGCGTTCGTCTCATGCCCGCTGTCG
AATCTCGTGCTGTCGGGCGACCGTGACATGGCGTCGATCACCGTGCCGTATGACGCGCTGGTCGAGCGCCACGGCGTGCG
GTGGGTGCGCGACCGCGCATCGGCCATCGACCCTGGCGCCAAGCAGGTGCGGCTGGCAGGCGGCGGCACGCTTGATTACG
ACCGGCTGATCCTCTCGCCCGGCATCGATTTCGTGCCCGGAGCCATCCCGGGTCTCGCCAATGCGGCCACCGCGGCGCAG
GCGCCGCACGCATGGAAGGCCGGCGTGCAGACGCTGGCGCTGCGCCATCGGCTCGAAGCCATGCCCAACGGCGGCACGGT
GGCGATCAGCATTCCGCTGGCGCCATACCGCTGCCCGCCCGCGCCGTACGAGCGTGCGTGCCTGATCGCCAACTGGCTGC
AGCGCGCCAAGCCCGATTCGCGCGTGCTCATCCTCGATGCCAACGACGACGTCACGTCCAAGGGGGCGCTGTTCAAGCGC
GTGTGGGCAGAGCGTTATCCACAGCACATCGAATATCGCCCGCAATACAACGCCGTCGACATCGATGCCACGGGCCGCGT
GCTCAAGTTCGATGTGCAGGACGACGTGCAGGCCGATGTCGTCAACCTGATCCCGCCGCAGCGCGCCGGGGCGATTGCCG
TGCAAGCCGGGTTGGCGACGGCCAACGGGCGCTGGTGCGAAGTGGACTTCCTGTCGTTTGAATCCAAGGTGGCGCCGGGC
GTGCATGTGATTGGCGATGCCATCCAGACCGCGCCGCTGATGCCCAAGTCGGGCCACATGGCCAATCAGCACGGCAAGGT
GGCCGCCGCCGCCGTGGTGGCGATGCTGGCCGGGCACGCGCCCGATGCGTCACCGCTGTACACCAACACCTGCTACAGCT
TTGCCACGCCCGACGAGGCCATGCACGTGGCAACCGTCCACCGTTACGACGCGACCGAGCACACCATGGTGACGGTGCCC
GGCGCCGGCGGGCTTTCCGACGTGCCTTCCGCAGCGGAGGGCAAGCTGGCGCAAGGCTGGAGCCGCGCCATCTGGTCGGA
CATGCTCGGTTGA

Upstream 100 bases:

>100_bases
CGCGCCCCTCCACGGTGATGGGCCAGATCGCCCGCGGTTATGACGATGCGCAGATCGCCGCCATTGCCGGCTGGCTGTCG
CGCCAACCGCAGGAGGCGCC

Downstream 100 bases:

>100_bases
ATGTCAGGCGGAAGGTGCGGCCCCGGGCACAAACAATGCGCAAGATTGTGCAAGTCGTGTAAGCGGCCCGCGCCTACAGT
GCGTCATGTGGCCGCACGGG

Product: flavocytochrome c sulfide dehydrogenase

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSERLRKDRRALLRALGATALAGPLAACASLSGVRNARVVVVGGGYGGATAAKYVRVFSGGHVDVTLVEPNAAFVSCPLS
NLVLSGDRDMASITVPYDALVERHGVRWVRDRASAIDPGAKQVRLAGGGTLDYDRLILSPGIDFVPGAIPGLANAATAAQ
APHAWKAGVQTLALRHRLEAMPNGGTVAISIPLAPYRCPPAPYERACLIANWLQRAKPDSRVLILDANDDVTSKGALFKR
VWAERYPQHIEYRPQYNAVDIDATGRVLKFDVQDDVQADVVNLIPPQRAGAIAVQAGLATANGRWCEVDFLSFESKVAPG
VHVIGDAIQTAPLMPKSGHMANQHGKVAAAAVVAMLAGHAPDASPLYTNTCYSFATPDEAMHVATVHRYDATEHTMVTVP
GAGGLSDVPSAAEGKLAQGWSRAIWSDMLG

Sequences:

>Translated_430_residues
MSERLRKDRRALLRALGATALAGPLAACASLSGVRNARVVVVGGGYGGATAAKYVRVFSGGHVDVTLVEPNAAFVSCPLS
NLVLSGDRDMASITVPYDALVERHGVRWVRDRASAIDPGAKQVRLAGGGTLDYDRLILSPGIDFVPGAIPGLANAATAAQ
APHAWKAGVQTLALRHRLEAMPNGGTVAISIPLAPYRCPPAPYERACLIANWLQRAKPDSRVLILDANDDVTSKGALFKR
VWAERYPQHIEYRPQYNAVDIDATGRVLKFDVQDDVQADVVNLIPPQRAGAIAVQAGLATANGRWCEVDFLSFESKVAPG
VHVIGDAIQTAPLMPKSGHMANQHGKVAAAAVVAMLAGHAPDASPLYTNTCYSFATPDEAMHVATVHRYDATEHTMVTVP
GAGGLSDVPSAAEGKLAQGWSRAIWSDMLG
>Mature_429_residues
SERLRKDRRALLRALGATALAGPLAACASLSGVRNARVVVVGGGYGGATAAKYVRVFSGGHVDVTLVEPNAAFVSCPLSN
LVLSGDRDMASITVPYDALVERHGVRWVRDRASAIDPGAKQVRLAGGGTLDYDRLILSPGIDFVPGAIPGLANAATAAQA
PHAWKAGVQTLALRHRLEAMPNGGTVAISIPLAPYRCPPAPYERACLIANWLQRAKPDSRVLILDANDDVTSKGALFKRV
WAERYPQHIEYRPQYNAVDIDATGRVLKFDVQDDVQADVVNLIPPQRAGAIAVQAGLATANGRWCEVDFLSFESKVAPGV
HVIGDAIQTAPLMPKSGHMANQHGKVAAAAVVAMLAGHAPDASPLYTNTCYSFATPDEAMHVATVHRYDATEHTMVTVPG
AGGLSDVPSAAEGKLAQGWSRAIWSDMLG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45409; Mature: 45278

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERLRKDRRALLRALGATALAGPLAACASLSGVRNARVVVVGGGYGGATAAKYVRVFSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC
GHVDVTLVEPNAAFVSCPLSNLVLSGDRDMASITVPYDALVERHGVRWVRDRASAIDPGA
CCEEEEEECCCCEEEECCHHHEEEECCCCEEEEECCHHHHHHHCCCHHHHHHHHCCCCCC
KQVRLAGGGTLDYDRLILSPGIDFVPGAIPGLANAATAAQAPHAWKAGVQTLALRHRLEA
CEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
MPNGGTVAISIPLAPYRCPPAPYERACLIANWLQRAKPDSRVLILDANDDVTSKGALFKR
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
VWAERYPQHIEYRPQYNAVDIDATGRVLKFDVQDDVQADVVNLIPPQRAGAIAVQAGLAT
HHHHHCCHHCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCEE
ANGRWCEVDFLSFESKVAPGVHVIGDAIQTAPLMPKSGHMANQHGKVAAAAVVAMLAGHA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDASPLYTNTCYSFATPDEAMHVATVHRYDATEHTMVTVPGAGGLSDVPSAAEGKLAQGW
CCCCCCCCCCEEECCCCCHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
SRAIWSDMLG
HHHHHHHHCC
>Mature Secondary Structure 
SERLRKDRRALLRALGATALAGPLAACASLSGVRNARVVVVGGGYGGATAAKYVRVFSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC
GHVDVTLVEPNAAFVSCPLSNLVLSGDRDMASITVPYDALVERHGVRWVRDRASAIDPGA
CCEEEEEECCCCEEEECCHHHEEEECCCCEEEEECCHHHHHHHCCCHHHHHHHHCCCCCC
KQVRLAGGGTLDYDRLILSPGIDFVPGAIPGLANAATAAQAPHAWKAGVQTLALRHRLEA
CEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
MPNGGTVAISIPLAPYRCPPAPYERACLIANWLQRAKPDSRVLILDANDDVTSKGALFKR
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
VWAERYPQHIEYRPQYNAVDIDATGRVLKFDVQDDVQADVVNLIPPQRAGAIAVQAGLAT
HHHHHCCHHCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCEE
ANGRWCEVDFLSFESKVAPGVHVIGDAIQTAPLMPKSGHMANQHGKVAAAAVVAMLAGHA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDASPLYTNTCYSFATPDEAMHVATVHRYDATEHTMVTVPGAGGLSDVPSAAEGKLAQGW
CCCCCCCCCCEEECCCCCHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
SRAIWSDMLG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]