| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is eamA [H]
Identifier: 187930524
GI number: 187930524
Start: 3618029
End: 3618916
Strand: Reverse
Name: eamA [H]
Synonym: Rpic_3459
Alternate gene names: 187930524
Gene position: 3618916-3618029 (Counterclockwise)
Preceding gene: 187930525
Following gene: 187930523
Centisome position: 91.79
GC content: 68.81
Gene sequence:
>888_bases ATGTCTCCCAAGGATCTGCTGCTGGCCCTGACCGTTGTGCTGGTGTGGGGCGTCAACTTCGTCGTCATCAAGGTGGGCCT GCACGGCGTGCCGCCCATGCTGCTGGGTGCGCTGCGCTTTGCGCTGGTCGCCTTCCCGGCTGTGCTGTTCGTGCCACGCC CAAAGATTGCGCTCAAGTGGCTGGTGGCTTACGGCGCCACCATCAGCTTCGGGCAGTTCGCGTTCCTGTTCTCCGCCATG TATGTGGGCATGCCGGCGGGGCTGGCCTCGCTGGTGCTGCAGTCGCAGGCGTTCTTTACGCTGACGATTGCCGCCATCGT GCTGCGCGAGCCGATCCGCTGGTTCCATCTGGCCGGCATGGCGGTGGCCGCGGGCGGGTTGGCCGCTATCGGCATGGCGG GCGGCGGCTCGGTCACGGGCATGACCACCGCCGGCTTCTTGCTGACGCTGTGCGCGGCGTTTTCGTGGGCCAGCGGCAAC ATCGTCACCAAGCGGATCGGGCCGGTGAATGTGGTGAGCCTGGTGGTGTGGGGTGCGGCCATCCCGCCGGTTCCGTTCTT CCTGCTGTCGTACTGGCTGGAGGGGCCGGAGCAGATTGCGCACAGCCTGGCGAACATCAGCGCGTCGAGCATCGGCGCGA TCGTCTACCTGTCCTTTGGCGCCACCATCTTCGGCTACAGCCTGTGGAGCCGCCTGCTGGCGCGCTACGCGGCCAGCCAG GTTGCGCCGCTCACGCTGCTGGTGCCGGTGGTGGGGCTGGTGTCGGCGGCCGTGCTGCTGGGCGAGCGCCTGGTGCCGGC CCAATGGCTGGGCGGCGCCGTGGTGATGGCCGGGCTGCTGCTCAACGTGTTTGGCGGCCGGCTGGCGGCGCGGCGGGCGA TGGCCTGA
Upstream 100 bases:
>100_bases GGCACAAACAATGCGCAAGATTGTGCAAGTCGTGTAAGCGGCCCGCGCCTACAGTGCGTCATGTGGCCGCACGGGCGGCC GTCCGAACCTTCCGATCATC
Downstream 100 bases:
>100_bases TCGCCGCATCCCCATCAAACCAGCGCCCGGGCCGAAAAGTACCGGGCGTTTTGCTTTGCGGGCGACATTTGCGGGCGACA TAGGATTTGGCCTGTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSPKDLLLALTVVLVWGVNFVVIKVGLHGVPPMLLGALRFALVAFPAVLFVPRPKIALKWLVAYGATISFGQFAFLFSAM YVGMPAGLASLVLQSQAFFTLTIAAIVLREPIRWFHLAGMAVAAGGLAAIGMAGGGSVTGMTTAGFLLTLCAAFSWASGN IVTKRIGPVNVVSLVVWGAAIPPVPFFLLSYWLEGPEQIAHSLANISASSIGAIVYLSFGATIFGYSLWSRLLARYAASQ VAPLTLLVPVVGLVSAAVLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARRAMA
Sequences:
>Translated_295_residues MSPKDLLLALTVVLVWGVNFVVIKVGLHGVPPMLLGALRFALVAFPAVLFVPRPKIALKWLVAYGATISFGQFAFLFSAM YVGMPAGLASLVLQSQAFFTLTIAAIVLREPIRWFHLAGMAVAAGGLAAIGMAGGGSVTGMTTAGFLLTLCAAFSWASGN IVTKRIGPVNVVSLVVWGAAIPPVPFFLLSYWLEGPEQIAHSLANISASSIGAIVYLSFGATIFGYSLWSRLLARYAASQ VAPLTLLVPVVGLVSAAVLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARRAMA >Mature_294_residues SPKDLLLALTVVLVWGVNFVVIKVGLHGVPPMLLGALRFALVAFPAVLFVPRPKIALKWLVAYGATISFGQFAFLFSAMY VGMPAGLASLVLQSQAFFTLTIAAIVLREPIRWFHLAGMAVAAGGLAAIGMAGGGSVTGMTTAGFLLTLCAAFSWASGNI VTKRIGPVNVVSLVVWGAAIPPVPFFLLSYWLEGPEQIAHSLANISASSIGAIVYLSFGATIFGYSLWSRLLARYAASQV APLTLLVPVVGLVSAAVLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARRAMA
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=292, Percent_Identity=55.4794520547945, Blast_Score=272, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30779; Mature: 30648
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKDLLLALTVVLVWGVNFVVIKVGLHGVPPMLLGALRFALVAFPAVLFVPRPKIALKW CCHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LVAYGATISFGQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAIVLREPIRWFHLAGM HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAGGLAAIGMAGGGSVTGMTTAGFLLTLCAAFSWASGNIVTKRIGPVNVVSLVVWGAA HHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCC IPPVPFFLLSYWLEGPEQIAHSLANISASSIGAIVYLSFGATIFGYSLWSRLLARYAASQ CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH VAPLTLLVPVVGLVSAAVLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARRAMA CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPKDLLLALTVVLVWGVNFVVIKVGLHGVPPMLLGALRFALVAFPAVLFVPRPKIALKW CHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LVAYGATISFGQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAIVLREPIRWFHLAGM HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAGGLAAIGMAGGGSVTGMTTAGFLLTLCAAFSWASGNIVTKRIGPVNVVSLVVWGAA HHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCC IPPVPFFLLSYWLEGPEQIAHSLANISASSIGAIVYLSFGATIFGYSLWSRLLARYAASQ CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH VAPLTLLVPVVGLVSAAVLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARRAMA CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]